Mushegian AR, Garey JR, Martin J, Liu LX (1998) Large-scale taxonomic profiling of eukaryotic model organisms: a comparison of orthologous proteins encoded by the human, fly, nematode, and yeast genomes.  Genome Research 8: 590-598.

These alignments are ascii files in MEGA format. All sites with gaps as well as unalignable regions have been deleted. See the reference above for more information.
 
 
ADHX CLH GTPC PRC3 RLA0 SERCA
ADT2 EF2 IF2B PRCZ RPB1 SODC
ATPASE ENOA IF4E PYR1 RS12 SYB
ATPB G6PD MA12 RFC RS3 TOP1
CATA GADPH METK RL17 RS5 TPIS
CDC42 GPDA NDKB RL22 SAHH VAT2