#Brachionus
?????????? ??AUGCA-UG UCUA-AGUA- CAU-ACC--- ------UUAG
#Philodina
?????????? ??AUGCA-UG UCUA-AGUAU GA--ACU--- ------GGUU
#N_pseudemydis
---------- --AUGCA-UG CGUA-AGUGC AU--ACU--- -------UUA
#Centrorhynchus
---------- --AUGCA-UG CGUA-AGUGA AU--ACU--- -------AGC
#Moniliformis
AAAGAUUAAG CCAUGCA-UG CGUA-AGUAC AU--ACU--- -------UUU
#Acanthopleura
AAAGAUUAAG CCAUGCA-UG UCUA-AGUAC AG--ACU--- ------UUCA
#Anemonia
AAAGAUUAAG CCAUGCA-UG UCUA-AGUAU AA--GCA--- ------CUUG
#Anthopleura
AAAGAUUAAG CCAUGCA-UG UCUA-AGUAU AA--GCA--- ------CUUG
#Artemia
AAAGAUUAAG CCAUGCA-UG UCUA-AGUAC AA--GCC--- ------CCCA
#C_elegans
AAAGAUUAAG CCAUGCA-UG CUUU---GAU U----CA--- ---------U
#Eisenia_foetida
AAAGAUUAAG CCAUGCA-UG UCUA-AGCA- CAA-ACC--- ------UUUA
#Eurypelma
AAAGAUUAAG CCAUGCA-UG UCUA-AGUAC AU--GCC--- ------UCCU
#Haemonchus_placei AAAGAUUAAG
CCAUGCA-UG UCG--AGUU- CA--UCU--- --------UU
#Homo_sapiens
AAAGAUUAAG CCAUGCA-UG UCUA-AGUAC GC--ACG--- -----GCCGG
#Lanice
UAAGAUUAAG CCAUGCA-UG UCUA-AGUA- CGA-ACU--- ------CUAA
#Lepidodermella
AAAGAUUAAG CCAUGCA-UG UCUA-AGUA- CAC-ACU--- ------ACGG
#Limicolaria_kambeul AAAGAUUAAG CCAUGCA-UG
UCUA-AGUU- CAC-ACU--- ------GUCU
#Mnemiopsis_leidyi AAAGAUUAAG
CCAUGCA-UG UCUA-AGUA- UAA-ACU--- ------UUUA
#Nematodirus_battus AAAGAUUAAG
CCAUGCA-UG UCG--AGUU- CA--UCU--- --------UU
#Opisthorchis_viverrini AGAGAUUAAG CCAUGCA-UG UCUA-AGUAC
AA--ACC--- ------UUCA
#Pellioditis_typica ??????????
???????-?? ????--???? ?---?----- ---------?
#Placopecten
AAAGAUUAAG CCAUGCA-UG UCUA-AGUAC AU--ACU--- ------UUUU
#Priapulus_caudatus AAAGAUUAAG
CCAUGCA-UG UCUA-AGUA- CAG-ACG--- ------GAUA
#Saccharomyces_cerevisiae AAAGAUUAAG CCAUGCA-UG UCUA-AGUA- UAA-GCA---
-----AUUUA
#Saccoglossus_kowalevskii AAAGAUUAAG CCAUGCA-UG UCUA-AGUA- CGA-GCC---
------UCGG
#Scypha_ciliata
AAAGAUUAAG CCAUGCA-UG UCUA-AGUAU AA--GCG--- ----UUCUUA
#S_purpuratus
AAAGAUUAAG CCAUGCA-UG UGUU-AGUAC AA--GCU--- ------UGUA
#Tenebrio_molitor
AAAGAUUAAG CCAUGCA-UG UCUC-AGUAC AA--GCC--- ------GAAU
#Xenopus_laevis
AAAGAUUAAG CCAUGCA-CG UGUA-AGUAC GC--ACG--- -----GCCGG
#Brachionus
C-AC------ -----GG-U- G-AAACCGCG AA-UGGCUCA UUAAAU-CAG
#Philodina
U-AA------ -----GG-U- G-AAACUGCG UA-CGGCUCA UUACAU-CAG
#N_pseudemydis
U-AU------ -----GG-U- UAAAACCGCG AA-UGGCUCA UUAAAU-AAG
#Centrorhynchus
A-AC------ -----GG-U- GAAAACCGCG AA-UGGCUCA UUAAAU-CAG
#Moniliformis
U-AUG----- -----GU-G- U-AAACCGCG AA-UGGCUCA UUACAU-CAG
#Acanthopleura
C-AU------ -----AG-U- G-AAACCGCA AA-UGGCUCA UUAAAU-CAG
#Anemonia
U-AC------ -----UG-U- G-AAACUGCG AA-UGGCUCA UUAAAU-CAG
#Anthopleura
U-AC------ -----UG-U- G-AAACUGCG AA-UGGCUCA UUAAAU-CAG
#Artemia
G-UG------ -----GG-C- G-AAACCGCG AA-UGGCUCA AUAAAU-CAG
#C_elegans
C-AA------ --------U- G-AAAUU-GC GUACGGCUCA UUAGAG-CAG
#Eisenia_foetida
C-AC------ -----GG-U- G-AAGCUGCG AA-UGGCUCA UUAGGC-CAC
#Eurypelma
U-AA------ -----GG-C- G-AAACCGCG AA-UGGCUCA UUAAAU-CAG
#Haemonchus_placei G-A-------
-----AG-A- G-AAACUGCG AA-CGGCUCA UUAGAG-CAG
#Homo_sapiens
U-AC------ -----AG-U- G-AAACUGCG AA-UGGCUCA UUAAAU-CAG
#Lanice
GCAC------ -----AG-U- G-AAACCGCG AA-UGGCUCA UUAAAC-CAG
#Lepidodermella
C-AA------ -----AG-U- G-AAACUGCG AA-CGGCUCA UUAAAU-CAG
#Limicolaria_kambeul C-AC------ -----GG-U-
G-AAACCGCG AA-UGGCUCA UUAAAU-CAG
#Mnemiopsis_leidyi U-AC------
-----UG-U- G-AAACUGCG AA-UGGCUCA UUA?AU-CAG
#Nematodirus_battus G-AG------
-----A---- G-AAACUGCG AA-CGGCUCA UUAGAG-CAG
#Opisthorchis_viverrini A-AC------ -----GG-U- G-AAACCGCG
AA-UGGCUCA UUAAAU-CAG
#Pellioditis_typica ?-??------
--------?? G-AAACUGCG AA-CGGCUCA UUAGAG-C--
#Placopecten
G-AU------ -----GG-U- G-AAACCGCG AA-UGGCUCA UUAAAU-CAG
#Priapulus_caudatus C-AA------
-----AG-U- G-AAACCGCG AA-UGGCUCA UUAAAU-CAG
#Saccharomyces_cerevisiae U-AC------ -----AG-U- G-AAACUGCG AA-UGGCUCA
UUAAAU-CAG
#Saccoglossus_kowalevskii U-ACAC---- -----GG-U- G-AAACUGCG AA-UGGCUCA
UUAAAU-CAG
#Scypha_ciliata
U-AC------ -----UG-U- G-AAACUGCG AA-UGGCUCA UUAAAU-CAG
#S_purpuratus
U--CA----- -----AG-C- G-AAACUGCG GA-UGGCUCA UUAAAU-CAG
#Tenebrio_molitor
U-AA------ -----GG-U- G-AAACCGCG AA-AGGCUCA UUAAAU-CAG
#Xenopus_laevis
U-AC------ -----AG-U- G-AAACUGCG AA-UGGCUCA UUAAAU-CAG
#Brachionus
UUAU--GGUU CCUUAGAUCG -UUC------ ---------- ---AU-AC-U
#Philodina
CUAUA-ACUU UCUUUGAUCA -UAA------ ---------- ---AU-UC-U
#N_pseudemydis
UCUU--GGUU UAUUAGAUCA -UGCGG---- ---------- ------AU-C
#Centrorhynchus
UUGC--AUUU UACGGUAACU -UGCAG---- ---------- ---------U
#Moniliformis
UUGU--GGUU CAUUAGAUCA -UAUG----- ---------- ------UU-U
#Acanthopleura
UUAU--GAUU UCUUAGAUCG -UACA----- ---------- ---CU-CC-U
#Anemonia
UUAU--CGUU UAUUUGAUUG -UACG----- ---------- --UUU-AC-U
#Anthopleura
UUAU--CGUU UAUUUGAUUG -UACG----- ---------- --UUU-AC-U
#Artemia
UUAU--GGUU CCUUAGAUCG -UACU----- ---------- -AUAU-CC-U
#C_elegans
AUAU--CACC UUAUCCGGG- -AUCC----- ---------- --GGAUCCUC
#Eisenia_foetida
CCAU--GAUU UCUUAGAUCG -UACA----- ---------- ---AU-CC-U
#Eurypelma
UUAU--GGUU CCUUAGAUCG -UACC----- ---------- ---UU-AC-U
#Haemonchus_placei AUGU--CAUU
UAUUCGGAAC -GU------- ---------- ------CC--
#Homo_sapiens
UUAU--GGUU CCUUUGGUCG -CUCGCU--- ---------- CCUCU-CC-C
#Lanice
UUAA--UAUU UCUUAGAUCG -UCCG----- ---------- ---AU-CC-U
#Lepidodermella
UUAU--GGUU UAUUAGAUCG -UGC------ ---------- ---CU-AU-C
#Limicolaria_kambeul UCGA--GGUU CCUUAGAUGA
-CACG----- ---------- ---AU-CC-U
#Mnemiopsis_leidyi UUAU--CGUC
UAUUUGAUUG -UGCC----- ---------- --CUU-AC-U
#Nematodirus_battus AUGU--CAUU
UAUUCGGAAA ---------- ---------- ---AU-CC-U
#Opisthorchis_viverrini CUAU--GGUU CCUUGGAUCG -UACA-----
---------- ----U-AC-U
#Pellioditis_typica UUAU-ACUAA
GCUAGCA-CC ---------- ---------- ---UG-CC-U
#Placopecten
UUAU--GGUU CCUUAGAUCG -UACG----- ---------- ---AU-CC-U
#Priapulus_caudatus UUAU--GGUU
CCUUAGAUCU -UACU----- ---------- ---AU-CC-U
#Saccharomyces_cerevisiae UUAU--CGUU UAUUUGAUAG -UUCC----- ----------
--UUU-AC-U
#Saccoglossus_kowalevskii UUAU--GGUU CCUUUGAUCG -UUAC----- ----------
---CC-CU-U
#Scypha_ciliata
UUAU--AGUU UAUUUGAUGU -UGAC----- ---------- ---UU-AC-U
#S_purpuratus
UCAU--GGUU CCUUGGAACG -AGUU----- ---------- ---GC-CC-U
#Tenebrio_molitor
UUAU--GGUU CCUUAGAUCG -UACC----- ---------- -CACA-UU-U
#Xenopus_laevis
UUAU--GGUU CCUUUGAUCG -CUCC----- ---------- -AUCU-GU-U
#Brachionus
ACAUGG-AUA ACUGUGGUAA U-UCUAGAGC UAAUACAUGC AA-----AAA
#Philodina
AAAUGGAAUA ACCGAGGAAA A-GCCUGGGC UAAUACAUGC G------AAA
#N_pseudemydis
AUAUGG-AUA ACUGUGGAAA A-UCUAGAGC UAAUACAUGC CA-----CGA
#Centrorhynchus
UCGUGG-AUA ACUGUGGAAA A-CCUAGAGC UAAUACAUGC AC-----AAA
#Moniliformis
AAAUGG-AUA ACUGUGGCAA A-UCUAGAGC UAAUACAUGU UU----ACAA
#Acanthopleura
ACUUGG-AUA ACUGUGGUAA U-UCUAGAGC UAAUACAUGA CG----UUCA
#Anemonia
ACUUGG-AUA ACCGUGGUAA U-UCUAGAGC UAAUACAUGC GA-----AGA
#Anthopleura
ACUUGG-AUA ACCGUGGUAA U-UCUAGAGC UAAUACAUGC GA-----AAA
#Artemia
ACUUGG-AUA ACUGUGGUAA U-UCUAGAGC UAAUACAUGC AC----AAUA
#C_elegans
AUAUGG-AUA ACUGCGGAAA U-ACUGGAGC UAAUACAUGC AA-----CUA
#Eisenia_foetida
ACUUGG-AUA ACUGCGGUAA U-UCUGGAGC UAAUACAUGC CA----CAAA
#Eurypelma
ACUUGG-AUA ACUGUGGUAA U-UCUAGAGC UAAUACAUGC AU----CAGA
#Haemonchus_placei UUUUGG-AUA
ACUGCGGUAA U-UCUGGAGC UAAUACAUGC AA----AUAA
#Homo_sapiens
ACUUGG-AUA ACUGUGGUAA U-UCUAGAGC UAAUACAUGC CG----ACGG
#Lanice
ACUUGG-AUA ACUGUGGUAA U-UCUAGAGC UAAUACAUGC AA----CAAA
#Lepidodermella
ACGUGG-AUA ACUGUGGUAA U-UCUAGAGC UAAUACAUGC AA-----CUA
#Limicolaria_kambeul ACUUGG-AUA ACUGUGGCAA
U-UCUAGAGC UAAUACAUGC UU---ACCAA
#Mnemiopsis_leidyi ACAUGG-AUA
ACCGUAGUAA U-UCUAGAGC UAAUACAUGC GA-----AAA
#Nematodirus_battus UUUUGG-AUA
ACUGCGGCAA U-UCUGGAGC UAAUACAUGC GU----UUAG
#Opisthorchis_viverrini ACAUGG-AUA ACUGUAUUAA U-UCUAGAGC
UAAUACAUGC CA----CUAU
#Pellioditis_typica UUUAGG-AUA
UCUUCGACAA A-U-UGAAGC UAAUACAUGC AA----CCAU
#Placopecten
ACUUGG-AUA ACUGUGGCAA U-UCUAGAGC UAAUACAUGC AA----AAAG
#Priapulus_caudatus ACUUGG-AUA
ACUGUGGUAA U-UCUAGAGC UAAUACAUGC AA----UCAG
#Saccharomyces_cerevisiae ACAUGGUAUA ACCGUGGUAA U-UCUAGAGC UAAUACAUGC
UU-----AAA
#Saccoglossus_kowalevskii ACUUGG-AUA ACUGUGGCAA U-UCUAGAGC UAAUACAUGC
CU--ACCUCG
#Scypha_ciliata
ACUUGG-AUA ACCGUGGUAA U-UCUAGAGC UAAUACAUGC GU----UAAA
#S_purpuratus
ACAUGG-AUA ACUGUGGUAA U-UCUAGAGC UAAUACAUGC UA----CCAA
#Tenebrio_molitor
ACUUGG-AUA ACUGUGGUAA U-UCUAGAGC UAAUACAUGC AA---ACAGA
#Xenopus_laevis
ACUUGG-AUA ACUGUGGUAA U-UCUAGAGC UAAUACAUGC CG----ACGA
#Brachionus
-GCUCCG-AC C-----GUAU G------GGA --AGAGC-GC UUUUAUUAGA
#Philodina
-AUUCCG-GU A-----GCA- -------AUA UCGGAAU-GC UUUUAUUAGA
#N_pseudemydis
-AUGCUU-CG U-----CUU- -------ACG AAGAAGU-GC UUUUAUUAGA
#Centrorhynchus
-GUCCUG-AC U-----UC-- -------GGC -AGGGAC-GC AUUUAUCAGA
#Moniliformis
-GCUCCG-AC U-----UCU- -------GGA -AAGAGC-GC UUUUGUUAGA
#Acanthopleura
-GCUCCG-AC CUU---UUUG C----AGGGA --AGAGC-GC UUUUAUUAGA
#Anemonia
-GUCCCG-AC U-----UCU- -------GGA -AGGGAU-GU AUUUAUUAGA
#Anthopleura
-GUCCCG-AC U-----UCU- -------GGA -AGGGAU-GU AUUUAUUAGA
#Artemia
-GCCCCA-AC U----UCAC- -------GGA -AGGGGU-GC UUUUAUUAGA
#C_elegans
-UACCCC-AA C-----GCAA G-------G- -CGGGGU-GC AAUUAUUAGA
#Eisenia_foetida
-GCUCCG-AC CC---UUAUG -------GGA -AAGAGC-GC GUUUAUUAGG
#Eurypelma
-GCUCCG-AC CC----UCUG ------GGGA --CGAGC-GC UUUUAUUAGA
#Haemonchus_placei -ACCCUG-AC
-----UUUU- --------GA -AAGGGU-GC AAUUAUUAGA
#Homo_sapiens
-GCGCUG-AC CCCC-UUCGC --GGGGGGGA --UGCGU-GC AUUUAUCAGA
#Lanice
-GCCCCG-A? C?---C?CGU ------CGGG -AGGGGC-GC UUUUAUUAGA
#Lepidodermella
-GCCCUG-AC U-----UAC- -------GGA --GGGGC-GC UUUUAUUAGA
#Limicolaria_kambeul -GCUCCG-AC C----CUCGC
-------GGA -AAGAGC-GC UUUUAUUAGU
#Mnemiopsis_leidyi -GUCCCG-AC
U-----UCU- -------GGA -AGGGAU-GU AUUUAUUAGA
#Nematodirus_battus -GCCCUG-AC
-----UUUU- --------GA -AAGGGU-GC AAUUAUUAGA
#Opisthorchis_viverrini -GCCCUG-AC CC---GCAA- ------GGGA
-ACGGGU-GG AUUUAUUAGA
#Pellioditis_typica -GGCUCC--U
------UCG- --------G- --GGGUC-GC A-AUAUUAGA
#Placopecten
-GCACCG-AC U-----CAC- -------GGA --GGUGC-GA UUUUAUCAGU
#Priapulus_caudatus -GCUCCG-AC
C----UUACG -------GGA --CGAGC-GC UUUUAUUAGA
#Saccharomyces_cerevisiae -AUCUCG-AC C----CUUU- -------GGA -AGAGAU-GU
AUUUAUUAGA
#Saccoglossus_kowalevskii -GCGCUG-AC C---UCGCG- -------GGA --UGC-U-GC
UUUUAUUAGG
#Scypha_ciliata
-GUCCUG-AC C---UCUCGG -------GGA -AGGGAU-GU AUUUAUUAGA
#S_purpuratus
-GCGCCG-AC C----UCUU- -------GGA -AGGCGU-GC UUUUAUUAGG
#Tenebrio_molitor
-GCUCCA-AC CG---GAAA- ------CGGA -AGGAGC-GC UUUUAUUAGA
#Xenopus_laevis
-GCGCUG-AC CC----CCA- ------GGGA --UGCGU-GC AUUUAUCAGA
#Brachionus
CCA----AAA CC-AAUGGGG UC-------- ---------G CAA-------
#Philodina
UCA----AAA CC-UUCUAGU UCU------- ------UUAA CC--------
#N_pseudemydis
UCA----AAG CC-AAUGACU UC-------- -------CUU C---------
#Centrorhynchus
UCA----AAG CC-AACUUUU CC-------- -------GGU ----------
#Moniliformis
UCA-----AA CC-AAUGAUU UC-------- --------AU CC--------
#Acanthopleura
UCA----AGA UC-AAUCGGG C--------- --------CU CG--------
#Anemonia
UUCA---AAA CC-AAUGCGG GU-------- --------UC U---------
#Anthopleura
UUCA---AAA CC-AAUGCGG GU-------- --------UC C---------
#Artemia
UCA----AGA CC-AAUCGGG ---------- ------GCUU CGG-------
#C_elegans
ACA-----GA CC-AAACGUU ---------- --------UU CG--------
#Eisenia_foetida
UCA----AAA CC-AAUCGGG UC-------- --------CU CGC-------
#Eurypelma
CCA----AAA CC-AAUCGGA ---------- -------CUC GU--------
#Haemonchus_placei GCA-----AA
UC-AAUCACU ---------- --------UU CG--------
#Homo_sapiens
UCA----AAA CC-AACCCGG UCAGCCCCUC UCCGGC--CC CG--------
#Lanice
UCA----AAA CC-AGACGG? ?G-------- --------UU CGC-------
#Lepidodermella
UCA----AAA UC-AAUCGGC ---------- --------UU CG--------
#Limicolaria_kambeul UCA----AAA CC-AAUCGUC
GUUGCCC--- -------UUC AGC-------
#Mnemiopsis_leidyi UUAA---AAA
CC-AAUGCGU U--------- --------UA AC--------
#Nematodirus_battus GCA-----AA
UC-AAUCUCC ---------- --------UU CG--------
#Opisthorchis_viverrini ACA----GAA CC-AACCGGC GGUGAC----
--------UU CGGUU-----
#Pellioditis_typica AC------UA
CC-AGU---- ---------- ---------- ----------
#Placopecten
CCA----AAA CC-AAUCGGU C--------- --------GC AA--------
#Priapulus_caudatus CCA-----AA
CC-AAUCGGG U--------- --------UU CG--------
#Saccharomyces_cerevisiae UAAA---AAA UC-AAUGUC- ---------- --------UU
C---------
#Saccoglossus_kowalevskii ACCA---AGA CC-GACCCGG UGUCCUGCCU CCU-----UC
GC--------
#Scypha_ciliata
UCCA---AAA CC-GAUGCAG UC-------- --------GA AA--------
#S_purpuratus
AACAA--AGA CC-AAGC--- ---------- --------CU AG--------
#Tenebrio_molitor
UCA----AAA CC-AAUCGGU GGCGG----- ---------U CU--------
#Xenopus_laevis
CCA----AAA CC-AAUCCGG GGC------- ------CCCC GC--------
#Brachionus
---------- ---------- -------GAU CCC---UUU- -GUAU-GGU-
#Philodina
---------- ---------- -------GGA ACUG--UU-- -UGUU-GGU-
#N_pseudemydis
---------- ---------- -------GGG U?GUCAAACG -UUGU-GCU-
#Centrorhynchus
---------- ---------- -------GAA CAGCCGGU-- -UAAU-GAU-
#Moniliformis
---------- ---------- -------GAA AUCA--CU-- -UAAU-GCU-
#Acanthopleura
---------- ---------- --------GC CCGU--CC-- -UGUU-GGU-
#Anemonia
---------- ---------- --------GC CCGG---UG- -CUUU-GGU-
#Anthopleura
---------- ---------- --------GC CCGG---UG- -UGUU-GGU-
#Artemia
---------- ---------- ---------C UCG-----UC -UCUU-GGU-
#C_elegans
---------- ---------- ---------- GACG----UU -GUUU-GUU-
#Eisenia_foetida
---------- ---------- -------GGC CCGU--AA-- -CUCU-GAU-
#Eurypelma
---------- ---------- ---------U CCGU---AUC -CCAU-GGU-
#Haemonchus_placei ----------
---------- ---------G GUG----CA- -GUUU-GCU-
#Homo_sapiens
---------- ----GCCGGG GGGCGGGCGC CGG----CGG -CUUU-GGU-
#Lanice
---------- ---------- -------CUC UGGU--CGG- -CUUU-GGU-
#Lepidodermella
---------- ---------- ---------G CCG---UUU- -UUGU-GAU-
#Limicolaria_kambeul ---------- ----------
---GGGCGCG GCGU--CC-- -AACU-GGU-
#Mnemiopsis_leidyi ----------
---------- ---------G ACGC---UU- --UUC-GGU-
#Nematodirus_battus ----------
---------- ---------G GUG----CU- -GUUU-GCU-
#Opisthorchis_viverrini ---------- ---------- ---GCCGUCG
UUGCA-UUC- --UGU-GAU-
#Pellioditis_typica ----------
---------- ---------- UUA---CUG- -GAUA-GUU-
#Placopecten
---------- ---------- --------GG CCG---UCA- -CUCU-GGU-
#Priapulus_caudatus ----------
---------- --------GC CCG---UUC- -UUUU-GGU-
#Saccharomyces_cerevisiae ---------- ---------- ---------- -GGAC---U-
-CUUU-GAU-
#Saccoglossus_kowalevskii ---------- --------GG GUGGUGGGCC CGG----UCC
-UCCU-GGC-
#Scypha_ciliata
---------- ---------- ---------G GCUGG--UU- --AUU-GGU-
#S_purpuratus
---------- ---------- ---------C CCG--C-UUU -CGUU-GGU-
#Tenebrio_molitor
---------- ---------- ----CCGUCA UCG--U-ACA -ACUU-GGU-
#Xenopus_laevis
---------- ---------- ------GCCC CGG----CCG -CUUU-GGU-
#Brachionus
GA-CUCUGGA UAACUUUGU- G--CUGA-U- CGCA--UGGC --CUAGA-GC
#Philodina
GA-CUCUAAA UAACUUUGU- G--UUGA-U- CGUA--UGAC -CUUUGU-GU
#N_pseudemydis
GA-UUCUGAG UAAAGUAA-- G--CUGA-U- UGCA-UUGCC -GUUUAG-GC
#Centrorhynchus
GA-CUCUGGG UAAUUAUU-- ---UUGA-U- CGCA-UUGCU -ACGUGA-AC
#Moniliformis
GA-GUCUGAA UAAAUUUG-- ---CAGA-U- UGCA-GCGGU -CUUCGU-AC
#Acanthopleura
GA-UUCUGAA UAACUUUGU- G--CUGA-U- CGCA--UGGC --CACGC-GC
#Anemonia
GA-UUCAUAG UAACUGAU-- ---CGAA-U- CGCA--UGGC --CUUGC-GC
#Anthopleura
GA-UUCAUAG UAACUGUU-- ---CGAA-U- CGCA--GGGC --CUUGGCGC
#Artemia
GA-CUCUGAA UAACUAUAG- ---CCGA-U- CGCA--CGGU --CUCGC-AC
#C_elegans
GA-CUCUGAA UAAAGCAG-- ---UUUA-C- UGU---CAGU ---UUCG-AC
#Eisenia_foetida
GA-CUCUGGA UAACUUCGA- G--CUGA-U- CGCA--UGGC --CUCGU-GC
#Eurypelma
GA-CUCUGUA UAACUUUGG- G--CUGA-U- CGCA--CGGG --CUUGU-CC
#Haemonchus_placei GA-CUCUGAA
UAACGCAG-- ---CAUA-U- CGG---CGG- --CUUGU--U
#Homo_sapiens
GA-CUCUAGA UAACCUCGG- G--CCGA-U- CGCA--CGCC -CCCCGU-GG
#Lanice
GA-CUCUGAG UAACUUAUU- G--CGGA-U- CGCA--UGGC --CUCGU-GC
#Lepidodermella
GA-CUCUGGA UAACUUU-U- G--CCGA-C- CGCA--UGGC --CUUGG-CC
#Limicolaria_kambeul GA-CUCUGGA UAACUUUGU-
G--CUGA-U- CGCA--UGGC CUUCUGU-GC
#Mnemiopsis_leidyi GA-UUCAUAA
UAACUGUU-- ---?GAA-U- CGCA--UGGC -CCUCGU-GC
#Nematodirus_battus GA-CUCUGAA
UAAUGCAG-- ---CAUA-U- CGG---CGG- --CUUGA--C
#Opisthorchis_viverrini GA-CUCUGGA UAACUUUA-- ---CUGA-U-
CGCAGUCGGC --CUUGU-GU
#Pellioditis_typica GA-CUUUAAU
UAUCGUAGA- AA-UCGG-C- AGCG--UGAG --CUC-----
#Placopecten
GA-AUCUGGA UAACUUUGU- G--CUGA-U- CGCA--CGGC -CCUAGU-GC
#Priapulus_caudatus GA-CUCUGGA
UAACCUUGC- G--CUGA-U- CGCA--CGGU --CUCGC-AC
#Saccharomyces_cerevisiae GA-UUCAUAA UAACUUUU-- ---CGAA-U- CGCA--UGGC
--CUUGU-GC
#Saccoglossus_kowalevskii GAACUCUGGA UAACUUGG-- ---CGGA-U- CG-A--CGGC
-CUCUGC-G-
#Scypha_ciliata
GA-UUCAUGA UAACUGAA-- ---CGG?-U- CGCA--UGGU --CUUGC-GC
#S_purpuratus
GAACUCUGGA UAACUUAG-- ---CAGA-U- CGCA--CGGU -CAUCGC-AC
#Tenebrio_molitor
GA-CUCUGAA UAACUUUAC- G--CUGA-U- CGCA--CGGU --CUUGC-AC
#Xenopus_laevis
GA-CUCUAGA UAACCUCGG- G--CCGA-U- CGCA--CGUC --CCCGU-GA
#Brachionus
CGGCG-ACG- UAUCUUUC-- AAGUGUCUG- CCCUAUC-AA CUUUC-GAUG
#Philodina
CGACG-ACA- UAUCUUUC-- AAGUGUCUG- ACUUAUC-AA CUUUA-GACG
#N_pseudemydis
AGGCG-ACG- UGUCUUUC-- AAGUGUCUU- ACCUAUC-AA CUAUC-GUUG
#Centrorhynchus
AGGCG-ACG- GUGACUUC-- AAACGCCUG- ACCUAUC-AA CUUGU-GUUG
#Moniliformis
CGGCG-ACG- UAUCUUUC-- AAGUGUCUG- CCCUAUC-AA CUGGC-GAUG
#Acanthopleura
CGGCG-ACG- UAUCUUUC-- AAGUGUCUG- CCCUAUC-AA CUUUC-GAUG
#Anemonia
UGGCG-AUG- UUUCAUUC-- AAAUUUCUG- CCCUAUC-AA CUGUC-GAUG
#Anthopleura
UGGCGGAUG- UUUCAUUC-- AAAUUUCUG- CCCUAUC-AA CUGUC-GAUG
#Artemia
CGGCG-ACG- UGUCUUUC-- AAAUGUCUG- CCUUAUC-AA CUUUC-GAUG
#C_elegans
UGACU-CUA- UCCGGAAA-- GGGUGUCUG- CCCUUUC-AA CUA---GAUG
#Eisenia_foetida
CGGCG-ACG- UAUCUUUC-- AAGUGUGUG- CCCUAUC-AA CUUUC-GAUG
#Eurypelma
CGGCG-ACG- CAUCUUUC-- AAGUGUCUG- CCUUAUC-AA CUGUC-GAUG
#Haemonchus_placei CGCCG-AUA-
UUCCGAAA-- AAGUGUCUG- CCCUAUC-AA CCU---GAUG
#Homo_sapiens
CGGCG-ACG- ACCCAUUC-- GAACGUCUG- CCCUAUC-AA CUUUC-GAUG
#Lanice
CGGCG-ACG- UAUCUUUG-- AAGUGUCUG- CCCUAUC-AA CUAUC-GUAU
#Lepidodermella
UGGCG-GCG- UAUCUUUC-- AAAUGUCUG- CCCUAUC-AA CUUUC-GAUG
#Limicolaria_kambeul CGGCG-ACG- CAUCUUUC--
AAAUGUCUG- CCCUAUC-AA AUGUC-GAUG
#Mnemiopsis_leidyi CGGCG-AUG-
UUUCAUUC-- GAGUUUCUG- CCCUAUC-AA CUUUC-GAUG
#Nematodirus_battus CGCUG-AUA-
AUCCGAAA-- AAGUGUCUG- CCCUAUC-AA CCU---GAUG
#Opisthorchis_viverrini CGGCG-ACG- G-UCUUUC-- AAAUGUCUG-
CCCUAUC-AA UUUUC-GAUG
#Pellioditis_typica ---CG-AUG-
GGUGCAAG-- UUAUGUACG- CCCUAUC-AC CCA---GCAG
#Placopecten
CGGCG-ACG- UAUCUUUC-- AAAUGUCUG- ACCUAUC-AA CUUUC-GAUG
#Priapulus_caudatus CGGCG-ACG-
UAUCUUUC-- AAAUGUCUG- CCUUAUC-AA CUUUC-GAUG
#Saccharomyces_cerevisiae UGGCG-AUG- GUUCAUUC-- AAAUUUCUG- CCCUAUC-AA
CUUUC-GAUG
#Saccoglossus_kowalevskii -GGCG-ACG- -AACUUUC-- GAGUGUCUG- CCCUAUC-AA
CUUUC-GACG
#Scypha_ciliata
CGGCG-AUG- ACUCAUAC-- AAAUAUCUG- CCCUAUC-AA CUUUC-GAUG
#S_purpuratus
CGGCG-ACAG AAACCAUC-- AAACGUCUG- CCCUAUC-AA CUUUC-GAUG
#Tenebrio_molitor
CGGCG-ACG- CAUCUUUC-- AAAUGUCUG- CCUUAUC-AA CUGUC-GAUG
#Xenopus_laevis
CGGCG-ACG- AUACAUUC-- GGAUGUCUG- CCCUAUC-AA CUUUC-GAUG
#Brachionus
GUAAGCG--A UUUGCCUACC AUGGU-UGUA ACGGGUAACG GGGAAU-CAG
#Philodina
GUACAUU--A UAUGUCUACC GUGGU-UGUA ACGAGUA-CA GAGAAU-CAG
#N_pseudemydis
GUAGUUG--A UAUGACUACC AUGGU-AAUA ACGGGUAACG GGGAAU-CAG
#Centrorhynchus
GCAGUUG--A UGUUACUACC CCGGU-UGUU ACGGGUGACG GGAAAU-CGG
#Moniliformis
GUAGUUU--A UGUGCCUACC AUGGU-UGUA ACGGGUAACG GGGAAU-CAG
#Acanthopleura
GUACGUG--A UAUGCCUACC AUGGU-UGUA ACGGGUAACG GAGAAU-CAG
#Anemonia
GUAAGGU--G UUGGCUUACC AUGGU-UACA ACGGGUGACG GAGAAU-UAG
#Anthopleura
GUAAGGU--A UUGGCUUACC AUGGU-UACA ACGGGUGACG GAGAAU-UAG
#Artemia
GUAGGCU--A UGCGCCUACC AUGGU-UGCA ACGGGUAACG GGGAAU-CGG
#C_elegans
GUAGUUU--A UUGGACUACC AUGGU-UGUU ACGGGUAACG GAGAAU-AAG
#Eisenia_foetida
GUACGUG--A UAUGCCUACC AUGGU-AGUA ACGGGUAACG GGGAAU-CAG
#Eurypelma
GUAGGCUU-A UGCGCCUACC AUGGU-C-UA ACGGGUAACG GGGAAU-CAG
#Haemonchus_placei GUAGUCU--A
UUAGUCUACC AUGGU-UAUU ACGGGUAACG GAGAAU-AAG
#Homo_sapiens
GUAGUCG--C CGUGCCUACC AUGGU-GACC ACGGGUGACG GGGAAU-CAG
#Lanice
GUGAGCG--C CUUGCCCACA UAGGU-UAUA ACGGGUAACG GGG-AU-CAG
#Lepidodermella
GUAGGUG--A CAUGCCUACC AUGGU-UGUA ACGGGUAACG GAGAAU-CAG
#Limicolaria_kambeul GUACGUG--A CAUGCCUACC
AUGUU-UGUA ACGGGUAACG GGGAAU-CAG
#Mnemiopsis_leidyi GUAAGGU--A
UUGGCUUACC AUGGU-GACA ACGGGUAACG GAGAAU-UAG
#Nematodirus_battus GUAGUCU--A
UUAGUCUACC AUGGU-UAUU ACGGGUAACG GAGAAU-AAG
#Opisthorchis_viverrini GUAGGUG--A CCUGCCUACC AUGGU-GAUA
ACGGGUAACG GGGAAU-CAG
#Pellioditis_typica GCUGUUU--A
ACCGACAGCC AGGGG-UAUA ACGGGUAACG GAGAAC-UA-
#Placopecten
GUACGUG--C UAUGCCUACC AUGGU-UGUA ACGGGUAACG GAGAAU-CAG
#Priapulus_caudatus GUAGAUU--A
UGUGCCUACC AUGGU-CGUA ACGGGUAACG GGGAAU-CAG
#Saccharomyces_cerevisiae GUAGGAU--A GUGGCCUACC AUGGU-UUCA ACGGGUAACG
GGGAAU-AAG
#Saccoglossus_kowalevskii GUACGUU--A UGCGCCUACC GUGGU-GGCA ACGGGUAACG
GGGAAU-CAG
#Scypha_ciliata
GUAAGGU--A GUGGCUUACC AUGGU-UGCA ACGGGUAACG GAGAAU-UAG
#S_purpuratus
GUACGUU--A UGCGCCUACC AUGGU-CGUA ACGGGUAACG GAGAAU-CAG
#Tenebrio_molitor
GUAGGUU--C UGCGCCUACC AUGGU-UGUA ACGGGUAACG GGGAAU-CAG
#Xenopus_laevis
GUACUUU--C UGCGCCUACC AUGGU-GACC ACGGGUAACG GGGAAU-CAG
#Brachionus
GGUUC-GAUU CCGGAG-AGG GAGCAUGAGA AACGGCUACC ACAUCUACGG
#Philodina
GGUUU-GGUU CUGGAG-AGG CCGCCUGAGA AACGGCGACC ACUUCCAAGG
#N_pseudemydis
GGUUC-GAUU CCGGAG-AGA GAGCAUGAGA AACGGCUGUC ACAUCCAAGG
#Centrorhynchus
GGUUU-UAUU CCGGAG-AGA GGGCAUGAGA AAUGGCUGUC ACAUCCAAGG
#Moniliformis
GGUUC-GAUU CCGGAG-AGA GAGCAUGAGA AACGGCUAUC ACAUCCAAGG
#Acanthopleura
GGUUC-GAUU CCGGAG-AGG GAGCAUGAGA AACGGCUACC ACAUCCAAGG
#Anemonia
GGUUC-GAUU CCGGAG-AGG GAGCCUGAGA AACGGCUACC ACAUCCAAGG
#Anthopleura
GGUUC-GAUU CCGGAG-AGG GAGCCUGAGA GACGGCUACC ACAUCCAAGG
#Artemia
GGUUC-GAUU CCGGAG-AGG GAGCCUGAGA AACGGCUACC ACAUCCAAGG
#C_elegans
GGUUC-GACU CCGGAG-AGG GAGCCUUAGA AACGGCUACC ACGUCCAAGG
#Eisenia_foetida
GGUUC-GAUU CCGGAG-AGG GAGCAUGAGA AACGGCUACC ACAUCCAAGG
#Eurypelma
GGUUC-GAUU CCGGAG-AGG CAGCCUGAGA AACGGCUACC ACAUCCAAGG
#Haemonchus_placei GGUUC-GACU
CCGGAG-AGG GAGCCUUAGA AACGGCUACC ACAUCCAAGG
#Homo_sapiens
GGUUC-GAUU CCGGAG-AGG GAGCCUGAGA AACGGCUACC ACAUCCAAGG
#Lanice
GGUUC-GAUU CCGGAG-AGG GAGCAUGAGA AACGGCUACC ACAUCUAAGG
#Lepidodermella
GGUUC-GAUU CCGGAG-AGG GAGCCUGAGA AACGGCUACC ACAUCCAAGG
#Limicolaria_kambeul GGUUC-GAUU CCGGAG-AGG
GAGCAUGAGA AACGGCUACC ACAUCCAAGG
#Mnemiopsis_leidyi GGUUC-GAUU
CCGGAG-AGG GAGCCCGAGA AACGGCUACC ACAUCCAAGG
#Nematodirus_battus GGUUC-GACU
CCGGAG-AGG GAGCCUUAGA AACGGCUACC ACAUCCAAGG
#Opisthorchis_viverrini GGUUC-GAUU CCGGAG-AGG GAGCCUGAGA
AACGGCUACC ACUUCCAAGG
#Pellioditis_typica GGUUC-GUCU
CCGGAG-AAG AAGCCUUCGA AA-GGCUACU ACAUCCAAGG
#Placopecten
GGUUC-GGUU CCGGAG-AGG GAGCAUGAGA AACGGCUACC ACAUCCAAGG
#Priapulus_caudatus GGUUC-GAUU
CCGGAG-AGG GAGCAUGAGA AACGGCUACC ACAUCCAAGG
#Saccharomyces_cerevisiae GGUUC-GAUU CCGGAG-AGG GAGCCUGAGA AACGGCUACC
ACAUCCAAGG
#Saccoglossus_kowalevskii GGUUC-GAUU CCGGAG-AGG GAGCCUGAGA AACGGCUACC
ACAUCCAAGG
#Scypha_ciliata
?GUUC-GAUU CCGGAG-AGG GAGCCUGAGA AACGGCUACC ACAUCCAAGG
#S_purpuratus
GGUUC-GAUU CCGGAG-AGG GAGCCUGAGA AAUGGCUACC ACAUCCAAGG
#Tenebrio_molitor
GGUUC-GAUU CCGGAG-AGG GAGCCUGAGA AACGGCUACC ACAUCCAAGG
#Xenopus_laevis
GGUUC-GAUU CCGGAG-AGG GAGCCUGAGA AACGGCUACC ACAUCCAAGG
#Brachionus
-AAGGC-AGC AGGCGCGCAA AUUACCC-AC UCC-UAGAA- ---CGGGGAG
#Philodina
-AAGGC-AGC AGGCGCGCAA AUUACCC-AC UCU-CAAAA- ---CGAGGAG
#N_pseudemydis
-AAGGC-AGC AGGCGCGCAA AUUACCC-AA UCC-UAGAU- ---CGGGGAG
#Centrorhynchus
-AUGGC-AGC AGGCGCGCAA AUUACCC-AA UUC-CCGAA- ---CGGAGAG
#Moniliformis
-AAGGC-AGC AGGCGCGCAA AUUACCC-AA UCC-UAGAU- ---CGGGGAG
#Acanthopleura
-AAGGC-AGC AGGCGCGCAA AUUACCC-AC UCC-UGGCA- ---CGGGGAG
#Anemonia
-AAGGC-AGC AGGCGCGCAA AUUACCC-AA UCC-UGACU- ---CAGGGAG
#Anthopleura
-AAGGC-AGC AGGCGCGCAA AUUACCC-AA UCC-UGACU- ---CAGGGAG
#Artemia
-AAGGC-AGC AGGCGCGCAA AUUACCC-AC UCC-CAGCA- ---CGGGGAG
#C_elegans
-AAGGC-AGC AGGCGCGAAA CUUAUCC-AC UGU-UGA--- ---GUAUGAG
#Eisenia_foetida
UAAGGC-AGC AGGCGCGCAA AUUACCC-AA UCC-CGACA- ---CGGGGAG
#Eurypelma
-AAGGC-AGC AGGCGCGCAA AUUACCC-AC UCC-CGGCA- ---CGGGGAG
#Haemonchus_placei -AAGGC-AGC
AGGCGCGAAA CUUAUCC-AA UCU-UGAAC- ---AGAUGAG
#Homo_sapiens
-AAGGC-AGC AGGCGCGCAA AUUACCC-AC UCC-CGACC- ---CGGGGAG
#Lanice
-AAGGC-AGC AGGCGCGCAA AUUACCC-AC UCC-UGGCA- ---CGGGGAG
#Lepidodermella
-AAGGC-AGC AGGCGCGCAA AUUACCC-AC UCC-CGACA- ---CGGGGAG
#Limicolaria_kambeul -AAGGC-AGC AGGC--ACAA
CUUACCC-A- CUC-CGGCA- ---CGGAGGG
#Mnemiopsis_leidyi -AAGGC-AGC
AGGCGCGCAA AUUACCC-AA UCC-CGAUU- ---CGGGGAG
#Nematodirus_battus -AAGGC-AGC
AGGCGCGAAA CUUAUCC-AA UCU-UGAAU- ---AGAUGAG
#Opisthorchis_viverrini -AAGGC-AGC AGGCGCGCAA AUUACCC-AA
UCC-CGGCA- ---CGGGGAG
#Pellioditis_typica -AAGGC-AGC
AGGCGCGUAA CUUAUCC-AC UAC----AU- ---CAGUGAG
#Placopecten
-AAGGC-AGC AGGCGCGCAA AUUACCC-AC UCC-UGGCA- ---CGGGGAG
#Priapulus_caudatus -AAGGC-AGC
AGGCACGCAA AUUACCC-AU UCC-CGGCA- ---CGGAGAG
#Saccharomyces_cerevisiae -AAGGC-AGC AGGCGCGCAA AUUACCC-AA UCC-UAAUU-
---CAGGGAG
#Saccoglossus_kowalevskii -AAGGC-AGC AGGCGCGCAA AUUACCC-AU UCC-CGACA-
---CGGGA-G
#Scypha_ciliata
-AAGGC-AGC AGGCGCGCAA AUUACCC-AA UCC-CGACA- ---CGGGGAG
#S_purpuratus
-AAGGC-AGC AGGCGCGCAA AUUACCC-AC UCU-CGACA- ---CGGGGAG
#Tenebrio_molitor
-AAGGC-AGC AGGCGCGCAA AUUACCC-AC UCC-CGGCA- ---CGGGGAG
#Xenopus_laevis
-AAGGC-AGC AGGCGCGCAA AUUACCC-AC UCC-CGACG- ---CGGGGAG
#Brachionus
GUAGUGACGA AAAAU-AACA AUACC-GGA- CUC---AAU- GAGGCUCGGU
#Philodina
GUAGUGAAGA GAAAU-AACG AUG---UUA- GUC--UAAUA UAGGCU-GAU
#N_pseudemydis
GUAGUGACGA AAAAU-AACG AUGCC-GUA- AUC---UUCG GAU--UCGGC
#Centrorhynchus
GUAGUGACGA GAAAU-AGCG AGGUC-GUG- GCC---UUUU GGC--CCGAC
#Moniliformis
GUAGUGACGA AAAAU-AACA AUGCC-GCA- GUC--GAAUA GAC--UCGGC
#Acanthopleura
GUAGUGACGA AAAAU-AACA AUACG-GGAU CUC---UUC- GAGGCCCCGU
#Anemonia
GUAGUGACAA GAACU-AACA AUACA-GGG- CUU--UUGU- AAG-UCUUGU
#Anthopleura
GUAGUGACAA GAAAU-AACA AUACA-GGG- CUU--UUCU- AAG-UCUUGU
#Artemia
GUAGUGACGA AAAAU-AACG AUGCA-GGA- CUC--AUCC- GAGGCCCUGU
#C_elegans
AUAGUGACUA AAAAU-AUAA AGACU-C-A- UCC--UUUU- GGA-U-GAGU
#Eisenia_foetida
GUAGUGACGA AAAAU-AACA AUACG-GGA- CUC--UUUU- GAGGCCCCGU
#Eurypelma
GUAGUGACGA AAAAU-AACA AUACG-GGA- CUC--UUUU- GAGACCCCGU
#Haemonchus_placei AUAGUGACUA
AAAAU-AAAA AGACC-AU-- UCC---UAU- GGA--ACGGU
#Homo_sapiens
GUAGUGACGA AAAAU-AACA AUACA-GGA- CUC--UUUC- GAGGCCCUGU
#Lanice
GUAGUGACAA GAAAU-AACA AUACG-GGA- CUC--UAUC- GAGGCCCCGU
#Lepidodermella
GUAGUGACGA AAAAU-AACA AUGCU-GGG- CU---UCA-- -AG-UCCGGU
#Limicolaria_kambeul GUAGUGACGA AAAAU-AACA
AUACG-GGA- CUC--UUUC- GAGGCCCCGU
#Mnemiopsis_leidyi GUAGUGACAA
UAAAU-AACG UUGCA-GGC- GCC--AAC-- GGC-UUCUGC
#Nematodirus_battus AUAGUGACUA
AAAAU-AAAA AGACC---A- UUC--CUAU- GGA--ACGGU
#Opisthorchis_viverrini GUAGUGACGA AAAAU-ACGG AUACG-GGA-
CUC--AUUA- GAGGCUCCGU
#Pellioditis_typica AUAGUAACUA
GUCUU-AACU AUUAA-CUG- ACU--UUUC- AAG--UUAGU
#Placopecten
GUAGUGACGA AAAAU-AACA AUACG-GGA- CUC--UUUC- GAGGCCCCGU
#Priapulus_caudatus GUAGUGACGA
UAAAU-AACA AUACG-GGA- CUC--UUUC- GAGGACCCGU
#Saccharomyces_cerevisiae GUAGUGACAA UAAAU-AACG AUACA-GGG- CCC--AUUC-
GGG-UCUUGU
#Saccoglossus_kowalevskii GUAGUGACGA AAAAU-AACG AUACG-GGA- CUC--UUUG-
GAGG-CCCGU
#Scypha_ciliata
GUAGUGACGA UAAAU-AACA AUGCA-GGA- CUC--UAAC- GAG-UCUUGC
#S_purpuratus
GUAGUGACGA AAAAU-AACA AUACA-GGA- CUC--UUUC- GAGGCCCUGU
#Tenebrio_molitor
GUAGUGACGA AAAAU-AACG AUACG-GGA- CUC--AUCC- GAGGCCCCGU
#Xenopus_laevis
GUAGUGACGA AAAAU-AACA AUACA-GGA- CUC--UUUC- GAGGCCCUGU
#Brachionus
AAUUGA--AA UGAGUACAGU UUAAAAC-CC UUAACGAGGA UCUAUUGGAG
#Philodina
AAUCGG--AA UGGAAACACU GUAAAAA-GG UUAUUGAUUA ACAAUUGGAG
#N_pseudemydis
AAUUGG--AA UGAGAACAAU CAAAAUC-CU UUAUCGAGGA UCAAUUGGAG
#Centrorhynchus
AAUUGA--AA UGAGAACACU GGAACAA-UG UUAUCGAGAA UCUAUUGGAG
#Moniliformis
AAUUGG--AA UGAGUACAAU CUAAAUC-CU UUAACGAGGA ACAAUUGGAG
#Acanthopleura
AAUUGG--AA UGAGUACACU UUAAAUC-CU UUAACGAGGA UCUAUUGGAG
#Anemonia
AAUUGG--AA UGAGUACAAC UUAAAUC-CU UUAACGAGGA UCCAUUGGAG
#Anthopleura
AAUUGG--AA UGAGUACAAC UUAAAUC-CU UUAACGAGGA UCCAUUGGAG
#Artemia
GAUUGG--AA UGAGUACACU UUAAAUC-CU UUAACGAGGA UCCAUUGGAG
#C_elegans
UAUUUC--AA UGAGUUGAAU ACAAAUG-AU UCUUCGAGUA GCAAGGAGAG
#Eisenia_foetida
AAUUGG--AA UGAGUACACU UUAAAUC-CU UUAACGAGGA UCAAUUGGAG
#Eurypelma
AAUUGG--AA UGAGUACACU CUAAAUC-CU UUAAC-AGGA UCUAUUGGAG
#Haemonchus_placei CAUUUC--AA
UGAGUUGAUC AUAAACC-UU UUUUCGAGGA UCAAGUGGAG
#Homo_sapiens
AAUUGG--AA UGAGUCCACU UUAAAUC-CU UUAACGAGGA UCCAUUGGAG
#Lanice
AAUUGG--AA UGAGCACAGU UUAAAUC-CU UUAACGAGGA UCUAUUGGAG
#Lepidodermella
AAUUGG--AA UGAGUACACU UUAAAUC-CU UUAACGAGGA UCUAGUGGAG
#Limicolaria_kambeul AAUUGG--AA UGAGUACACU
UUAAACC-CU UUAACGAGGA UCUAUUGGAG
#Mnemiopsis_leidyi AGUCGG--AA
UGAGUACAAU AUAACAC-CC UUAACGAGGA ACAAUUGGAG
#Nematodirus_battus CAUUUC--AA
UGAGUUGAGC UUAAACC-UU UUUUCGAGGA UCAAGUGGAG
#Opisthorchis_viverrini AAUUCG--AA UGAGUACAAU UUAAAUC-CU
UUAACGAGGA UCAACUGGAG
#Pellioditis_typica UAUGGUC-CA
UGAGUUGAGC UUAAAUA-GC UCUUCGAGGA UCAAGUGGAG
#Placopecten
AAUUGG--AA UGAGUACACU UUAAACC-CU UUAACGAGUA UCCAUUGGAG
#Priapulus_caudatus AAUUGG--AA
UGAGUACACU UUAAAUC-CU UUAACGAGGA UCUAUUGGAG
#Saccharomyces_cerevisiae AAUUGG--AA UGAGUACAAU GUAAAUA-CC UUAACGAGGA
ACAAUUGGAG
#Saccoglossus_kowalevskii AAUCGG--AA UGAGCACAGU CCAAAUC-CU UUAGCGAGGA
UCCAUUGGAG
#Scypha_ciliata
AAUUGG--AA UGAGAACAAU UUAAACC-CC UUAACGAGGA ACAAUUGGAG
#S_purpuratus
AAUUGG--AA UGAGUACACU UUAAAUC-CU UUAACGAGGA UCUACUGGAG
#Tenebrio_molitor
AAUCGG--AA UGAGUACACU CUAAACC-CU UUAACGAGGA UCAAUUGGAG
#Xenopus_laevis
AAUUGG--AA UGAGUACACU UUAAAUC-CU UUAACGAGGA UCUAUUGGAG
#Brachionus
GGCAAG-UCU GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCCAAUAG
#Philodina
GGCAAG-UCU GGU--GCCAG C--AGCCGCG --UAAUUCCA GCUCCAAUAA
#N_pseudemydis
GGCAAGUUCU GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCGAAUAG
#Centrorhynchus
GGCAAGUUCU GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCGAAGAG
#Moniliformis
GGCAAGUUCU GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCGAAUAG
#Acanthopleura
GGCAAG-UCU GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCCAAUAG
#Anemonia
GGCAAG-UCU GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCCAAUAG
#Anthopleura
GGCAAG-UCU GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCCAAUAG
#Artemia
GGCAAG-UCU GGU--GCCAG C--AGCCGCG G-UAACUCCA GCUCCAAUAG
#C_elegans
GGCAAG-UCU GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCUCCUAG
#Eisenia_foetida
GGCAAG-UCU GGU--GCCAG C--AGCCGCG --UAAUUCCA GCUCCAAUAG
#Eurypelma
GGCAAG-UCU GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCCAAUAG
#Haemonchus_placei GGCAAG-UCU
GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCCACUAG
#Homo_sapiens
GGCAAG-UCU GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCCAAUAG
#Lanice
GGCAAG-UCU GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCCAAUAG
#Lepidodermella
GGCAAG-UCU GGU?GACCAG C--AGCCCGC GGUAAUUCCA GCUCCACGAG
#Limicolaria_kambeul GGCAAG-UCU GGU--GCCAG
C--AGCCGCG G-UAAUUCCA GCUCCAAUAG
#Mnemiopsis_leidyi GGCAAG-UCU
GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCCAAUAG
#Nematodirus_battus GGCAAG-UCU
GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCCACUAG
#Opisthorchis_viverrini GGCAAG-UCU GGU--GCCAG C--AGCCGCG
G-UAACUCCA GCUCCAGAAG
#Pellioditis_typica GGCAAG-UCU
GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCCACUAG
#Placopecten
GGCAAG-UCU GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCCAAUAG
#Priapulus_caudatus GGCAAG-UCU
GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUUCAAUAG
#Saccharomyces_cerevisiae GGCAAG-UCU GGU--GCCAG C--AGCCGCG G-UAAUUCCA
GCUCCAAUAG
#Saccoglossus_kowalevskii GGCAAG-UCU GGU--GCCAG C-UUGCCGCG --UAAUUCCA
GCUCCAAUAG
#Scypha_ciliata
GGCAAG-UCU GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCCAAUAG
#S_purpuratus
GGCAAG-UCU GGU--GCCAG C--AGCCGCG --UAAUUCCA GCUCCAGUAG
#Tenebrio_molitor
GGCAAG-UCU GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCCAAUAG
#Xenopus_laevis
GGCAAG-UCU GGU--GCCAG C--AGCCGCG G-UAAUUCCA GCUCCAAUAG
#Brachionus
CGUAUAUUAA AGUUGUUGCA GUUAAAAAGC UCGUAGUUGG AUCUC-GGGU
#Philodina
GGAAAACUAA AGUUGCUGUG UUUAAAAAGC UCGUAGUUGA AUUUC-GGGU
#N_pseudemydis
CGUAUGUUAA AUUUGCUGCG GUUAAAAAGC UCGUAGUUGG GUAUC-AGGA
#Centrorhynchus
CGUAUGUCAA AGUUGCUGUG GUUAAAACGC UCGUCGUUGG ACAUC-AGGA
#Moniliformis
CGUAUAUUAA AGUUGUUGCA GUUAAAAAGC UCGUAGUUGG AUAUC-AGGA
#Acanthopleura
CGUAUAUUAA AGUUGUUGCA GUUAAAAAGC UCGUAGUUGG AUCUC-GGGU
#Anemonia
CGUAUAUUAA AGUUGUUGCA GUUAAAAAGC UCGUAGUUGG ACUUC-GGGG
#Anthopleura
CGUAUAUUAA AGUUGUUGCA GUUAAAAAGC UCGUAGUUGG ACUUC-GGGG
#Artemia
CGUAUAUUAA AGUUGCUGCG GUUAAAAAGC UCGUAGUUGG AUAUG-GGUC
#C_elegans
UGUAUCUCGU UAUUGCUGCG GUUAAAAAGC UCGUAGUUGG AUCUA-GGUU
#Eisenia_foetida
CGUAUACUAA AGUUGUUGCA GUUAAAAAGC UCGUAGUUGG AUCUC-GGGU
#Eurypelma
CGUAUAUUAA AGUUGUUGCG GUUAAAAAGC UCGUAGUUGG AUCUC-AGUU
#Haemonchus_placei UGUAAAUCGU
CAUUGCUGCG GUUAAAAAGC UCGUAGUUGG AUCUG-AGUU
#Homo_sapiens
CGUAUAUUAA AGUUGCUGCA GUUAAAAAGC UCGUAGUUGG AUCUU-GGGA
#Lanice
CGUAUAUUAA UGUUGCUGCA GUUAAAAAGC UCGUAGUUGG AUCUC-GGGU
#Lepidodermella
CAUGUACGUA AGUUGUUGCA GUUAAAAAGC UCGUAGUUGG AUCUC-AGGC
#Limicolaria_kambeul CGUAUAUUAA AGUUGUUGCA
GUUAAAAAGC UCGUAGUUGG AUCUC-AGGC
#Mnemiopsis_leidyi CGUAUAUUAA
AGUUGUUGCA GUUAAAAAGC UCGUAGUUGG AUUUC-GGAA
#Nematodirus_battus UGUAAAUCGU
CAUUGCUGCG GUUAAAAAGC UCGUAGUUGG AUCUG-AGUC
#Opisthorchis_viverrini CGUAUAUUAA AGUUGUUGCA GUUAAAAAGC
UCGUAGUUGG AUCUG-GGUC
#Pellioditis_typica CGUAAAUUAU
UACUGCUGCG GUUAAAAAGC UCGUAGUUGA AUCU--AGAC
#Placopecten
CGUAUAUUAA AGUUGUUGCA GUUAAAAAGC UCGUAGUUGG AUCUC-AGGU
#Priapulus_caudatus CGUAUAU-AA
AGUUGUUGCA GUUAAAAAGC UCGUAGUUGG AUCUG-GGGC
#Saccharomyces_cerevisiae CGUAUAUUAA AGUUGUUGCA GUUAAAAAGC UCGUAGUUGA
ACUUU-GGGC
#Saccoglossus_kowalevskii CGUAUAUUAA AGCUGCUGCA GUUAAAAAGC UCGUAGUUGG
AUCUU-GGUC
#Scypha_ciliata
CGUAUAUUAA AGUUGUUGCA GUUAAAAAGC UCGUAGUUGG AUUUC-GGAG
#S_purpuratus
CGUAUAUUAA UGCUGCUGCA GUUAAAAAGC UCGUAGUCGU AUCUA-GGGC
#Tenebrio_molitor
CGUAUAUUAA AGUUGUUGCG GUUAAAAAGC UCGUAGUCGA AUCUG-UGUC
#Xenopus_laevis
CGUAUAUUAA AGUUGCUGCA GUUAAAAAGC UCGUAGUUGG AUCUU-GGGA
#Brachionus
A-CUAGC--A UGU-GGUACG -C-------- ---------- ----------
#Philodina
A-UUUGU--U GCU---AGCU -GGU------ ---------- ----------
#N_pseudemydis
G-AUGAA--C UCU-GCG-CU -GUC------ ---------- ----------
#Centrorhynchus
G-GCGGG--U CGU-AGA-CG -ACC------ ---------- ----------
#Moniliformis
G-AUGAU--U GAC-GG-ACU -UC------- ---------- ----------
#Acanthopleura
U-CAGGC--U GGA-GGUCCG -CC------- ---------- ----------
#Anemonia
U-GGCAC--G GCC-GGUCCG -CC------- ---------- ----------
#Anthopleura
U-GGG----C GCC-GGUCCG -CC------- ---------- ----------
#Artemia
--UCGGUC-G GGU-GGUGCC -G-------- ---------- ----------
#C_elegans
A-CGUG---C CGC-AGUUCG -C-------- ---------- ----------
#Eisenia_foetida
--CGUGCC-G AGC-GGUUCG -C-------- ---------- ----------
#Eurypelma
--CCAGAC-G GGC-GGUCCG -CC------- ---------- ----------
#Haemonchus_placei A-CAUG---C
AGU-GAUUCG -C-------- ---------- ----------
#Homo_sapiens
--GCGGGC-G GGC-GGUCCG -CC------- ---------- ----------
#Lanice
C-CAGGC--C UGC-GGUUCC -G-------- ---------- ----------
#Lepidodermella
U-UGUGG--C CGU-GGUCCG -CU------- ---------- ---------C
#Limicolaria_kambeul G-CAGGC--G GGC-GGUCCG
-GC------- ---------- ----------
#Mnemiopsis_leidyi C-CGGCC--G
AUU-GGUCCG -UC------- ---------- ----------
#Nematodirus_battus A-CAU-G--C
AGU-GGUUCG -C-------- ---------- ----------
#Opisthorchis_viverrini G-CAUGG--C UAC-AUGCCG -UUGCUCGUA
UUCCUGGC-- ----------
#Pellioditis_typica G-UGUAU--U
GUU-GGCAUG -CU------- ---------- ---------U
#Placopecten
C-CAGGC--U UGC-GGUCCA -CU------- ---------- ----------
#Priapulus_caudatus U-UAGGC--U
GGU-GGUCCA -U-------- ---------- ----------
#Saccharomyces_cerevisiae --CCGGUUG- GCC-GGUCCG -A-------- ----------
----------
#Saccoglossus_kowalevskii C-GCGGGCG- GGC-GGUUCU -C-------- ----------
----------
#Scypha_ciliata
C-GGAGC--U CAC-GGUCCG -CCU------ ---------- ----------
#S_purpuratus
--UUGGGC-U GAG-GGUCCG -UC------- ---------- ----------
#Tenebrio_molitor
--CCGCGC-C GCC-GGUUCA -UCG------ ---------- ----------
#Xenopus_laevis
--UCGAGCU- GGC-GGUCCG -CC------- ---------- ----------
#Brachionus
-UUUUUU--- ---------- ---------- ---------- -GCU--GU--
#Philodina
---CGU---- ---------- ---------- ---------- ACUGACAU-G
#N_pseudemydis
-UAUUAU--- ---------- ---------- ---------- GUACAGCA--
#Centrorhynchus
-AAGU----- ---------- ---------- ---------- GUUGUUAC--
#Moniliformis
--UCAAU--- ---------- ---------- ---------- GGAG--CA--
#Acanthopleura
--UCGC---- ---------- ---------- ---------- GGCG--GC--
#Anemonia
--GCAA---- ---------- ---------- ---------- -GUGU-GU--
#Anthopleura
--GCAA---- ---------- ---------- ---------- -GUGU-GU--
#Artemia
--CCUCA--- ---------- ---------- ---------- -CGG--UG--
#C_elegans
--AAUUU--- ---------- ---------- ---------- -GCG--UC--
#Eisenia_foetida
--UUC----- ---------- ---------- ---------- -GCG-GCGG-
#Eurypelma
--UAAC---- ---------- ---------- ---------- GGUGG-UU--
#Haemonchus_placei -CUUUG----
---------- ---------- ---------- -GCG--UU--
#Homo_sapiens
--GCGA---- ---------- ---------- ---------- GGCGA-GC--
#Lanice
--CCCGU--- ---------- ---------- ---------- -GCG--GA--
#Lepidodermella
GAUACG---- ---------- ---------- ---------- GGUG--UG--
#Limicolaria_kambeul --UCGC---- ----------
---------- ---------- GCCG--UU--
#Mnemiopsis_leidyi --CUCU----
---------- ---------- ---------- GGAU--CG--
#Nematodirus_battus -CUUUG----
---------- ---------- ---------- -GCG--UU--
#Opisthorchis_viverrini ---CUG---- ---------- -----GUUCA
CACCGGGA-C GGGU--UU--
#Pellioditis_typica UUGGC-----
---------- ---------- ---------- ----------
#Placopecten
--CCUU---- ---------- ---------- ---------- GGUG--GC--
#Priapulus_caudatus CUAGCG----
---------- ---------- ---------- -AUG--GU--
#Saccharomyces_cerevisiae -UUUUU---- ---------- ---------- ----------
-UCG--UG--
#Saccoglossus_kowalevskii -CGUACGAGU ---------- ---------- ----------
-GGGU-CU-U
#Scypha_ciliata
--UUUC---- ---------- ---------- ---------G GGUG--UG--
#S_purpuratus
--GUAAGG-- ---------- ---------- ---------- GGUG--C---
#Tenebrio_molitor
--UUCG---- ---------- ---------- ---------C GGUG--UUA-
#Xenopus_laevis
--GCGA---- ---------- ---------- ---------- GGCG--GC--
#Brachionus
UACUAC-AUG U----CUGG- --UCCUAA-- --------UC AACCGGU---
#Philodina
UUGGUU-AA- -----CAGA- --UCCUCAC- ---------- UUGCUGGA--
#N_pseudemydis
UUGCGU-GA- ---GCUUCG- -CUCCUUA-- ---------U GUUUAACC--
#Centrorhynchus
UGCGU----- ---GCCU-G- -CUCCUAAGA U--------U AUGCUU----
#Moniliformis
ACCGUG-U-- ----UUUCG- -CUCCUCUUU --------GU ACCGUUUC--
#Acanthopleura
UACUUC-CCG ---CUCCU-- GACCUACC-- ---------A UCGGGUU---
#Anemonia
CACUGG-CCG ----GGCCG- -CUCUUCU-- ---------- -UCGCAAAG-
#Anthopleura
CACUGG-CCG -----GGCC- GCUCUUC--- ---------- CUCGCAAAG-
#Artemia
-GUCAC--UG CC-UCGAUC- GGACA----- --------AU UCAUUGGAU-
#C_elegans
AACUGU--GG U----C--G- UGACUUCUAA ---------U UUGCUGGU--
#Eisenia_foetida
UACUUC-UCG G---C?C-G- -GCCUAGC-- ---------C GCCGGUCU--
#Eurypelma
-ACUGC-CUG GC---CUG-- -AACA----- -------GCC CAGCCGGUU-
#Haemonchus_placei AAUCGC-UGU
U-------G- UAACUA---- ---------U UUGCUGGU--
#Homo_sapiens
CACCGC--CC GU-CCCCGC- CCCUUGCC-- ---------- -UCUCGGCG-
#Lanice
UACUGC-UCG U---CC--G- -ACCUA---- ---------C CAGCCGGCCG
#Lepidodermella
CACUGC--CG U---GCCCG- GUCU------ ---------A CGUCUGGU--
#Limicolaria_kambeul CACUGC-CCG ----UUGU--
CCUCCUGCCC UACCGU--CU GCCGGCUCU-
#Mnemiopsis_leidyi UGUACU-GA-
--UCGGUCU- GUUCUUC--- ---------- UUCGCGAAG-
#Nematodirus_battus AAUCGC-UGU
U-------G- UGACUA---- ---------U UUGCUGGU--
#Opisthorchis_viverrini GUGAGU-CGG ----UGUCG- UGGUUGUGCA
GCCUU---UC UGCCGUGU--
#Pellioditis_typica -AUUCAUUUG
U---CAUUG- GCUUUAGCCU ---------U CAACCGUC--
#Placopecten
UACUGC-UCG ----UCCU-- GACCUAC--- --------CU CCCGGUU---
#Priapulus_caudatus UACUGGCCUG
U---CCUGG- -CCUUUA--- ---------C CUCCCGGU--
#Saccharomyces_cerevisiae UACUGGAUUU C--CAACGG- GGCCUUUCC- ----------
-UUCUGGCU-
#Saccoglossus_kowalevskii CGCUGC--CC GU--CCCG-- GACUCUC--- ----------
-CUCCGGUC-
#Scypha_ciliata
CACUGU-GC- ---UGUUCU- GUUCUUC--- ---------- UUCUCGUGG-
#S_purpuratus
-ACUCU---- GAGUACCA-- GCCUCCC--- ---------- -UCGCGGCUU
#Tenebrio_molitor
-ACUGG-CGU GC---CGCG- GGACG----- --------UC CUGCCGGUGG
#Xenopus_laevis
UACCGC--CU GU-CCCAG-- CCCCUGCC-- ---------- -UCUCGGCG-
#Brachionus
---------- ---------- ---------- ---------- ----------
#Philodina
---------- ---------- ---------- ---------- ----------
#N_pseudemydis
---------- ---------- ---------- ---------- ----------
#Centrorhynchus
---------- ---------- ---------- ---------- ----------
#Moniliformis
---------- ---------- ---------- ---------- ----------
#Acanthopleura
---------- ---------- ---------- ---------- ----------
#Anemonia
---------- ---------- ---------- ---------- ----------
#Anthopleura
---------- ---------- ---------- ---------- ----------
#Artemia
---------- ---------- ---------- ---------- ----------
#C_elegans
---------- ---------- ---------- ---------- ----------
#Eisenia_foetida
---------- ---------- ---------- ---------- ----------
#Eurypelma
---------- ---------- ---------- ---------- ----------
#Haemonchus_placei ----------
---------- ---------- ---------- ----------
#Homo_sapiens
---------- ---------- ---------- ---------- ----------
#Lanice
A--------- ---------- ---------- ---------- ----------
#Lepidodermella
---------- ---------- ---------- ---------- ----------
#Limicolaria_kambeul ---------- ----------
---------- ---------- ----------
#Mnemiopsis_leidyi ----------
---------- ---------- ---------- ----------
#Nematodirus_battus ----------
---------- ---------- ---------- ----------
#Opisthorchis_viverrini ---CUGU--- UUCGACAGGU GUUAGCAUGA
UUGGUGGG-U UCGU-CCCUG
#Pellioditis_typica ----------
---------- ---------- ---------- ----------
#Placopecten
---------- ---------- ---------- ---------- ----------
#Priapulus_caudatus ----------
---------- ---------- ---------- ----------
#Saccharomyces_cerevisiae ---------- ---------- ---------- ----------
----------
#Saccoglossus_kowalevskii ---------- ---------- ---------- ----------
----------
#Scypha_ciliata
---------- ---------- ---------- ---------- ----------
#S_purpuratus
G--------- ---------- ---------- ---------- ----------
#Tenebrio_molitor
GCUUAGCUC- -GUGA--GGG CGGCC----- ---------- ----------
#Xenopus_laevis
---------- ---------- ---------- ---------- ----------
#Brachionus
---------- ---------- ---------- ---------- ----------
#Philodina
---------- ---------- ---------- ---------- ----------
#N_pseudemydis
---------- ---------- ---------- ---------- ----------
#Centrorhynchus
---------- ---------- ---------- ---------- ----------
#Moniliformis
---------- ---------- ---------- ---------- ----------
#Acanthopleura
---------- ---------- ---------- ---------- ----------
#Anemonia
---------- ---------- ---------- ---------- ----------
#Anthopleura
---------- ---------- ---------- ---------- ----------
#Artemia
---------- ---------- ---------- ---------- ----------
#C_elegans
---------- ---------- ---------- ---------- ----------
#Eisenia_foetida
---------- ---------- ---------- ---------- ----------
#Eurypelma
---------- ---------- ---------- ---------- ----------
#Haemonchus_placei ----------
---------- ---------- ---------- ----------
#Homo_sapiens
---------- ---------- ---------- ---------- ----------
#Lanice
---------- ---------- ---------- ---------- ----------
#Lepidodermella
---------- ---------- ---------- ---------- ----------
#Limicolaria_kambeul ---------- ----------
---------- ---------- ----------
#Mnemiopsis_leidyi ----------
---------- ---------- ---------- ----------
#Nematodirus_battus ----------
---------- ---------- ---------- ----------
#Opisthorchis_viverrini CCUGAUCUGU UGACAU---- ----------
---------- ----------
#Pellioditis_typica ----------
-----U---- ---------- ---------- ----------
#Placopecten
---------- ---------- ---------- ---------- ----------
#Priapulus_caudatus ----------
---------- ---------- ---------- ----------
#Saccharomyces_cerevisiae ---------- ---------- ---------- ----------
----------
#Saccoglossus_kowalevskii ---------- ---------- ---------- ----------
----------
#Scypha_ciliata
---------- ---------- ---------- ---------- ----------
#S_purpuratus
---------- ---------- ---------- ---------- ----------
#Tenebrio_molitor
---------- ---------- ---------- ---------- ----------
#Xenopus_laevis
---------- ---------- ---------- ---------- ----------
#Brachionus
---------- ---------- --------UG GCC-GU--UG AUGUCC--UU
#Philodina
---------- ---------- --------CG GCU-GG--CG AUGAUC--UU
#N_pseudemydis
---------- ---------- ---------- AUU-CC--UG A-GCCC--GA
#Centrorhynchus
---------- ---------- -------GUC UCU-UG--AG AUGCGC--UU
#Moniliformis
---------- ---------- ---------- AUC-GU--UG AUGCAC--UU
#Acanthopleura
---------- ---------- ---------U UCC-CU--UG GUGCUC--UU
#Anemonia
---------- ---------- ---------- ACC-GC--GU GUGCUC--UU
#Anthopleura
---------- ---------- ---------- ACU-GC--GU GUGCUC--UU
#Artemia
---------- ---------- ---------C GUU-CG--GG GUGCUC--UU
#C_elegans
---------- ---------- ---------- -UU-GA---G GUUGGG--UU
#Eisenia_foetida
---------- ---------- ---------- UCG-CU--UG GUGCUC--UU
#Eurypelma
---------- ---------- ---------- UCC-CU--AG AUGAUC--UU
#Haemonchus_placei ----------
---------- ---------- UUU-CU--AU UGAGGU--UU
#Homo_sapiens
---------- ---------- ---------C CCC-CU--CG AUGCUC--UU
#Lanice
---------- ---------- ---------- -CC-CU--UG GUGCCC--UU
#Lepidodermella
---------- ---------- ------UUAC AAC-CU-AUA GUGCUC--UU
#Limicolaria_kambeul ---------- ----------
--------CU CCC-GC--GG GUGCUC--UU
#Mnemiopsis_leidyi ----------
---------- ---------- ACC-GC--GU GUGCCC--UU
#Nematodirus_battus ----------
---------- ---------- UUU-CU--AU UGAGGU--UU
#Opisthorchis_viverrini ---------- ---------- --------GC
UUC-CC--AG GUGCCU--UA
#Pellioditis_typica ----------
---------- -----UUGCU GGU-UU--UC -UGUUG--GU
#Placopecten
---------- ---------- --------UU ACC-CU--UG GUGCUC--UU
#Priapulus_caudatus ----------
---------- --------CU AUC-UU--UG UUGCUC--UU
#Saccharomyces_cerevisiae ---------- ---------- ---------- -AA-CC--UU
-GAGUC--CU
#Saccoglossus_kowalevskii ---------- ---------- ---------C UCU-CC--CG
GUGCUC--UU
#Scypha_ciliata
---------- ---------- ---------- AGC-GU--GU GUGCUC--UU
#S_purpuratus
---------- ---------- ---------- UCG-CC--CG GUUCUC--UU
#Tenebrio_molitor
---------- ---------C AACUCAAUCC CGC-CG--CG GUGCUC--UU
#Xenopus_laevis
---------- ---------- ---------C CUC-CC--CG AUGCUC--UU
#Brachionus
UAUUGG-GUG UUU---UCGG UA-----GCC GGUAC-G-UU UACUUUGAGA
#Philodina
CAUCGA-UUG UCG---UCAG UU-----GCC AGAAC-G-UU UACUUUGAGA
#N_pseudemydis
AA--GG-GUG U-----ACGG AA------GG UGAACGG-AC UACUUUGAGA
#Centrorhynchus
CAUUGU-GUG UCUC--GGUG AA------GA GCCAC-U-GU CACUUUGAGA
#Moniliformis
UAUUGU-GUG UC----ACGU UU-----GAA CGGCCUU-UU UACUUUGAGA
#Acanthopleura
GACUGA-GUG UCU---CGGG G------GGC CAGAACG-UU UACUUUGAAA
#Anemonia
GACUGA-GUG UGC---GCGG GAG----UUG CGA--CG-UU UACUUUGAAA
#Anthopleura
GACUGA-GUG UGC---GCAG GUAC---UUG CGA--CG-UU UACUUUGAAA
#Artemia
AACCGA-GUG UCC---UGGG UG-----GCC GAUAC-G-UU UACUUUGAAC
#C_elegans
CG--CC-CUU CA----ACU- ------GCCA GCAG--G-UU UACCUUGAAU
#Eisenia_foetida
CGUUGA-GUG CCU---CGCG ------CGGC CGACAGA-UU UACUUUGAAA
#Eurypelma
CACCGG-UUG UCC---UGGG UG-----ACC GGCAC-G-UU UACUUUGAAA
#Haemonchus_placei CGGCUU-CUU
UA----GUG- -------GCU AGCGA-G-UU UACUUUGAAU
#Homo_sapiens
AGCUGA-GUG UCCC--GCGG GG-----CCC GAAGC-G-UU UACUUUGAAA
#Lanice
AACUGG-GUG UCU---CGGG CGGG--CCCG GAAC--G-UU UACUUUGAAA
#Lepidodermella
AACCGG-GUG CU----AUAG GCU---GCCA CAA-A-G-UU UACUCUGAAA
#Limicolaria_kambeul CGCUGA-GCG UCC---CGGG
U-----GGCC GGCG-CG-UU UACUUUGAAA
#Mnemiopsis_leidyi AACUGG-GUG
GGC---G?GG GAU----UCG CGA--CG-UU UACUUU?AAA
#Nematodirus_battus CG--AU-CUC
UUU---AGUG -------GCU AGCGA-G-UU UACUUUGAAU
#Opisthorchis_viverrini ACCGGG-UCG UCG---GGGG C-----GGAC
GGCAC-G-UU UACUUUGAAC
#Pellioditis_typica GUUCGC-AUC
UUC---AGUG ------GCCA GCGA--G--U UACUUUGACC
#Placopecten
GAUUGA-GUG UCU---CGGG U------GGC CGGAACA-UU UACUUUGA-A
#Priapulus_caudatus GACUGA-GUG
ACU---CGGG UU----GCCG GAA-C-G-UU UACUUUGAAA
#Saccharomyces_cerevisiae UGU-GG-CUC U-----UGGC GA----ACCA GGA-C-U-UU
UACUUUGAAA
#Saccoglossus_kowalevskii GGUUGA-GUG UCG---GGGG CG----GCCG GAA-C-G-UU
UACUUUGAAG
#Scypha_ciliata
CAUUGA-GUG UGC---ACGU AAC----UCG GGA-C-U-UU UACUUUGAAA
#S_purpuratus
AACUGA-GUC CCG---GGUG CG-----GCC GGAAC-G-UU UACUUUGAAA
#Tenebrio_molitor
CGUUGA-GUG UCG---AGGU GG-----GCC GGCAC-G-UU UACUUUGAAC
#Xenopus_laevis
GACUGA-GUG UCC---CGGG GG-----CCC GAAGC-G-UU UACUUUGAAA
#Brachionus
AAAUUAGAGU GCUUAAAGCA GCC------- ---------- ---UUAA---
#Philodina
AAAUUAGAGU GCUAAAAGCA GGC------- ---------- ---UCAC---
#N_pseudemydis
AAAUUAGCGU GCUCAAUGCA GGC------- ---------- ----GACU--
#Centrorhynchus
AACUCAGUGU GCUCAAUGCA GGC------- ---------- ---UAACU--
#Moniliformis
AAAUUAGCGU GCUUAACGCA GGC------- ---------- --GUUACA--
#Acanthopleura
AAAUUAGAGU GUUCAAAGCA GGC------- ---------- --CCCGUC--
#Anemonia
AAAUUAGAGU GUUCAAAGCA GGC------- ---------- ---CAGC---
#Anthopleura
AAAUUAGAGU GUUCAAAGCA GGC------- ---------- ---CAGC---
#Artemia
AAAUUAGAGU GCUUAAAGCA GGUGC----- ---------- ---ACCGC--
#C_elegans
AAAUCAGAGU GCUCAAUACA AGC------- ---------- ---GCUU---
#Eisenia_foetida
AAAUUAGAGU GCUCAAAGCA GGC------- ---------- ---GCUUC--
#Eurypelma
AAAUUAGAGU GCUCAAAGCA GGC------- ---------- ---GUGUA--
#Haemonchus_placei AAAUUAGAGU
GCUCAGAACA AGC------- ---------- ---GUUU---
#Homo_sapiens
AAAUUAGAGU GUUCAAAGCA GGC------- ---------- -CCGAGCC--
#Lanice
AAAUUAGAGU GUUCAAAGCA GGC------- ---------- --GGCUC---
#Lepidodermella
AAAUUAGAGU GCUUAAAGCA AGC------- ---------- --CGUUUGU-
#Limicolaria_kambeul AAAUUAGAGU GUUCAAAGCA
GGC------- ---------- -CCCAGCU--
#Mnemiopsis_leidyi AAAUUAGAGU
GUUCAAAGCA GGC------- ---------- ---AGUC---
#Nematodirus_battus AAAUUAGAGU
GCUCAGAACA AGC------- ---------- ---GUUU---
#Opisthorchis_viverrini AAAUUUGAGU GCUCAAAGCA GGC-------
---------- ---CCGUGU-
#Pellioditis_typica AAAUCAGAGU
GCUCAAAACA GGC------- ---------- ---GAAA---
#Placopecten
AAAUUAGAGU GUUCAAAGCA GGC------- ---------- --AAUUC---
#Priapulus_caudatus AAAUUAGAGU
GUUCAAAGCA GGC------- ---------- ---UUUUU--
#Saccharomyces_cerevisiae AAAUUAGAGU GUUCAAAGCA GGC------- ----------
---GUAUU--
#Saccoglossus_kowalevskii AAAUUAGAGU GUUCAAAGCA GGC--C---- ----------
---GCCAC--
#Scypha_ciliata
AAAUUAGAGU GUUCAAAGCA GGC------- ---------- ---CUUG---
#S_purpuratus
AAAUUGGAGU GUUCAAAGCA GGC--G---- ---------- ---CAACA--
#Tenebrio_molitor
AAAUUAGAGU GCUUAAAGCA GGCUAA---- ---------- --AACU----
#Xenopus_laevis
AAAUUAGAGU GUUCCAAGCA GGC------- ---------- --CGCGUC--
#Brachionus
---------- -----GCCUG AAUAA--UGU UGCAUGGAA- UAAUAGAAUA
#Philodina
---------- -----GCCUA UAUA---UAU UGCAUGGAA- UAAUGAAAUA
#N_pseudemydis
---------- -----GCUUG UAUAC--UUA UGCGUGGAA- UAAUGAGAAA
#Centrorhynchus
---------- -----GCUCG AAUUA--CGC UGCAUGGGA- UGAUGAAAUG
#Moniliformis
---------- -----GCUUG UAUAG--UGU UGCAUGGAA- UAAUGAAAUA
#Acanthopleura
---------- -----GCCUG AAUAA--UGG UGCAUGGAA- UAAUGGAAGA
#Anemonia
---------- -----GCUUG AAUAC--AUA AGCAUGGAA- UAAUGGAAUA
#Anthopleura
---------- -----GCUUG AAUAC--AUA AGCAUGGAA- UAAUGGAAUA
#Artemia
---------- -----GCCUG AAUAU--CAC AGCAUGGAA- UGAUGGAAUA
#C_elegans
---------- -----GCUUG AAUAG--CUC AUCAUGGAA- UAAUGAAACA
#Eisenia_foetida
---------- -----GCUUG UAUAG--UCG UGCAUGGAA- UAAUGGAAUA
#Eurypelma
---------- -----GCCUG AAUAA--UGG UGCAUGGAA- UAAUGGAAUA
#Haemonchus_placei ----------
-----GCUUG AAUGG--UCG AUCAUGGAA- UAAUAAAAGA
#Homo_sapiens
---------- -----GCCUG GAUAC--CGC AGCUAGGAA- UAAUGGAAUA
#Lanice
---------- -----GCCUG AAUAA--UGG UGCAUGGAA- UAAUAGAAGA
#Lepidodermella
---------- -----GCUUG AAUAC--UGU UGCAUGGAA- UAAUAGAAUA
#Limicolaria_kambeul ---------- -----GCCUG
AAUAA--UGG UGCAUGGAA- UAAUGGAAUA
#Mnemiopsis_leidyi ----------
-----GCU?G AAUAU--CUC AGCAUGGAA- UAAUAGAAUA
#Nematodirus_battus ----------
-----GCUUG AAUGG--UCG AUCAUGGAA- UAAUAAAAGA
#Opisthorchis_viverrini ---------- -----GCCUG AAAAU--UCU
UGCAUGGAA- UAAUGGAAUA
#Pellioditis_typica ----------
-----GCUUG UAUGA--UUU CUCGAGGAA- UAACAGAAUA
#Placopecten
---------- -----GCCUG AAUAA--UGG UGCAUGGAA- UAAUGGAAUA
#Priapulus_caudatus ----------
-----GCCUG AAUAA--UGG UGCAUGGAA- UAAUGGAAUA
#Saccharomyces_cerevisiae ---------- -----GCUCG AAUAU--AUU AGCAUGGAA-
UAAUAGAAUA
#Saccoglossus_kowalevskii ---------- -----GCCUG GAUAG--UCC AGCAUGGAA-
UAAUGGAAUA
#Scypha_ciliata
---------- -----GCUUG AAU?C--AUU AGCAUGGAA- UAAUGAAAUA
#S_purpuratus
---------- -----GCCUG AACAG--UAG AGCAUGGAA- UAAUGGAAUA
#Tenebrio_molitor
---------- ---UCGCCUG AAUAC-UGUG UGCAUGGAA- UAAUGGAAUA
#Xenopus_laevis
---------- -----GCCUG GAUAC--UUC AGCUAGGAA- UAAUGGAAUA
#Brachionus
GGA-CCU-CG GUUCU-AUUU UGUUGGUUU- ---------- ------UGUA
#Philodina
AGA-UCU-CG AUUUU-AUUU CGUUGGU--- ---------- ------UUUA
#N_pseudemydis
GGA-CCU-CG GUUCU-GUUU CGUUGGUU-- ---------- ------UCCG
#Centrorhynchus
GGG-UCU-CC GCUCC-GUUU CGUUGGUU-- ---------- ------UACG
#Moniliformis
GGA-CCU-CG GUUCU-GUUU UGUUGGUU-- ---------- ------UCCG
#Acanthopleura
GGA-CCU-CG GUUCU-AUUU UGUUGGUU-- ---------- ------UUCG
#Anemonia
GGA-CUU-GG GUUCU-AUUU UGUUGGUU-- ---------- ------UCUG
#Anthopleura
GGA-CUU-GG GUUCU-AUUU UGUUGGUU-- ---------- -----UCGUG
#Artemia
GGA-CCU-CG GUCUU-AUUA UGUUGGUU-- ---------- ------UUCU
#C_elegans
GGA-CUU-CG GUUCU--UUU UGUUGGU--- ---------- ------UCUA
#Eisenia_foetida
GGA-CCU-CG GUUCU-AUUU UGUUGGUU-- ---------- ------UUCG
#Eurypelma
GGA-CUU-CG UUUCU-AUUU UGUUGGUU-- ---------- ------UUCG
#Haemonchus_placei GGA-CUU-CG
GUUCU--AUU UAUUGGU--- ---------- ------UCAG
#Homo_sapiens
GGA-CCG-CG GUUCU-AUUU UGUUGGUU-- ---------- ------UUCG
#Lanice
GGA-CCU-UG GUUCU-AUUU UGUUGGUU-- ---------- ------UCCG
#Lepidodermella
GGA-CCU-CG GAUCU-AUUU UGUUGGUU-- ---------- ------UUCG
#Limicolaria_kambeul GGA-CCU-CG GUUCU-AUUU
UGUUGUUU-- ---------- -------UCG
#Mnemiopsis_leidyi GGA-CUU-UG
GUCUU-AUUU UGUUGGUU-- ---------- ------UCCG
#Nematodirus_battus GGA-CUU-CG
GUUCU--AUU UAUUGGU--- ---------- ------UCAG
#Opisthorchis_viverrini GGA-CUU-CG GUUCU-AUUU UGUUGGUU--
---------- ------UUCG
#Pellioditis_typica GGA-CUU-CG
GUUCU--UGU UGUUGGU--- ---------- ------UCCA
#Placopecten
GGA-CCU-CG GUUCU-AUUU UGUUGGUU-- ---------- ------UUCG
#Priapulus_caudatus GGA-CCU-CG
GUUCU-AUUU UGUUGGUU-- ---------- ------UUCG
#Saccharomyces_cerevisiae GGA-CGUUUG GUUCU-AUUU UGUUGGUU-- ----------
------UCUA
#Saccoglossus_kowalevskii GGA-CCU-CG GU-CC-AUUG CGUUGGUC-- ----------
------UUAG
#Scypha_ciliata
GGA-CUU-UG GUUCU-AUUU UGUUGGUU-- ---------- ------UUCG
#S_purpuratus
GGA-CCU-CG GUUCU-AUUG CGUUGGUU-- ---------- ------UUAA
#Tenebrio_molitor
GGA-CCU-CG GUUCU-AUUU UGUUGGUU-- ---------- ------UUCG
#Xenopus_laevis
GGA-CUC-CG GUUCU-AUUU UGUUGGUU-- ---------- ------UUCG
#Brachionus
GAGC-AUUGA GGUA-AUGAU UAAUAGGGAC AGA-CGGGGG CAUUCGU-AU
#Philodina
GAA--AUUGA GAUA-AUGAU UAAUAGGAUC AGA-GGGGGG CGUACGU-AC
#N_pseudemydis
GAAG-C-UGA GGUA-AUGAU UGAUAGGGAC AAA-CGGGGG CAUUCGU-AU
#Centrorhynchus
AAAG-C-AGA GAAC-AUGAU UAAUCGGGAC AGA-CGGGGG CAUUCGU-AU
#Moniliformis
GAAG-C-UGA GGUA-AUGAU UAAUAGGGAC AGA-CGGG?G ?AUUCGU-AU
#Acanthopleura
GAA-GU-CGA GGUA-AUGAU UAAGAGGGAC AGA-CGGGGG CAUUCGU-AU
#Anemonia
GAAC-C-UGA AGUA-AUGAU UAAGAGGGAC AGU-UGGGGG CAUUCGU-AU
#Anthopleura
GAAC---CGA AGUA-AUGAU UAAGAGGGAC AGU-UGGGGG CAUUCGU-AU
#Artemia
GGAC-U-UGA GGUA-AUGGU UAACAGAGAC AGA-CGGGGG CAUUCGU-AC
#C_elegans
GAAC---UGA UUUA-AUGGU UAAGAGGGAC AAACCGGGGG CAUUCGU-AU
#Eisenia_foetida
GAAC-U-UGA GGUA-AUGAU UAAGAGGGAC AGA-CGGGGG CAUUCGU-AU
#Eurypelma
GAAU-A-CGA GGUA-AUGAU UAAGAGGGAC AGA-CGGGGG CAUUCGU-AU
#Haemonchus_placei GAAC---UGA
AAUA-AUGGU UAAGAGGGAC AAUUCGGGGG CAUUCGU-AU
#Homo_sapiens
GAAC---UGA GGCC-AUGAU UAAGAGGGAC GGC-CGGGGG CAUUCGU-AU
#Lanice
GAAC-U-GGA GGUA-AUGAU UGAGAGGGAC UGC-CGGGGG CAUUCGU-AU
#Lepidodermella
GAGU---CGA GGUA-AUGAU UAAGAGGGAC AGA-CGGGGG CAUUCGU-AU
#Limicolaria_kambeul GAAC-U-GGA GGUA-AUGAU
UAACAGGGAC AAA-CGGGGG CAUUCGU-AU
#Mnemiopsis_leidyi AGAC---CGA
AGUA-AUGAU UAAUAGGGAC AGU-UGGGGG CAUUCGU-AU
#Nematodirus_battus GAAC---UGA
AAUA-AUGGU UAAGAGGGAC AAUUCGGGGG CAUUCGU-AU
#Opisthorchis_viverrini GAUC---CGA AGUA-AUGGU UAAAAGGGAC
AGA-CGGGGG CAUUUGU-AU
#Pellioditis_typica GAAU-CGU--
-UUA-AUGGU UAAGAGGGAC AAUUCGGGGG CAGCCGU-AU
#Placopecten
GAAC-U-UGA GGUA-AUGAU UAUGAGGGAC AGA-CGGGGG CAUUCGU-AU
#Priapulus_caudatus GAAC-A-UGA
GGAA-AUGAU UAAGAGGAAC AGA-CGGGGG CAUUCGU-AC
#Saccharomyces_cerevisiae GGAC---CAU CGUA-AUGAU UAAUAGGGAC GGU-CGGGGG
CAUCGGU-AU
#Saccoglossus_kowalevskii GAAC-G-CGA GGUA-AUGAU CGAGAGGGAC UGA-CGGGGG
CAUUCGU-AU
#Scypha_ciliata
GAAC---CAA GGUA-AUGAC ?AAUAGGGAC AGU-UGGGGG CAUUCGU-AU
#S_purpuratus
GAGU-C-CGA GGUA-AUGAU UCACAGGGAC UGA-CGGGGG CAUUCGU-AU
#Tenebrio_molitor
GAAUUU-UGA GGUA-AUGAU UAAUAGGAAC GGA-UGGGGG CAUUCGU-AU
#Xenopus_laevis
GAAC---UGG GGCC-AUGAU UAAGAGGGAC GGC-CGGGGG CAUUCGU-AU
#Brachionus
UGCGGUG-UU AGAGGUGAAA UUCUUGGAUC GCCGCAAG-A CGAACAAC--
#Philodina
UGUGGUG-UG AGAGGUGAAA UUCUUGGAUC GCCAC----A GGACGAAC-A
#N_pseudemydis
UGUGGUG-UU AGAGGUGAAA UUCUGUGAUC ACCGCAAG-A CGAGCUAC--
#Centrorhynchus
UGCGGUG-CU AGAAGUGAAA UUCUGUGACC AUCGCAAG-A CGAACAAC--
#Moniliformis
UGUGGUG-UU AGAGGUGAAA UUCUUGGAUC ACCGCCAG-A CGAACAAC--
#Acanthopleura
UACGGUG-UU AGAGGUGAAA UUCUUGGAUC GCCGUAAG-A CGAACUAC--
#Anemonia
U-CGUUG-UC AGAGGUGAAA UUCUUGGAUU UACGAAAG-A CGAACUAC--
#Anthopleura
UUCGUUG-UC AGAGGUGAAA UUCUUGGAUU UACGAAAG-A CGAACUAC--
#Artemia
UGCGACG-CU AGAGGUGAAA UUCUUGGACC GUCGCAAG-A CGAACAAC--
#C_elegans
CAUUACG-CG AGAGGUGAAA UUCGUGGACC GUAGUGAG-A CGCCCAA-C-
#Eisenia_foetida
UACGGUG-UC AGAGGUGAAA UUCUUGGAUC GCCGUAAG-A CGAACUAC--
#Eurypelma
UGCGACG-CU AGAGGUGAAA UUCUUGGACC GUCGCAAG-A CGAACUAC--
#Haemonchus_placei CCCUGCG-CG
AGAGGUGAAA UUCGUGGACC GCAGGGGG-A CGCCCUAA--
#Homo_sapiens
UGCGCCG-CU AGAGGUGAAA UUCUUGGACC GGCGCAAG-A CGGACCAG--
#Lanice
UACGGUG-UU AGAGGUGAAA UUCUUGGAUC GCCGUAAG-A CGAACGAG--
#Lepidodermella
UGCGCCG-UU AGAGGUGAAA UUCUUGGAUC GGCGCAAG-A CGAACAAC--
#Limicolaria_kambeul UGCGGCG-UU AGAGGUGAAA
UUCUUGGAUC GCCGCAAG-A CGAGCUAC--
#Mnemiopsis_leidyi UUCAUUG-UC
AGAGGUGAAA UUCUUGGAUU UAUGAAAG-A CGAACUUC--
#Nematodirus_battus CCCUGCG-CG
AGAGGUGAAA UUCGUGGACC GCAGGGGG-A CGCCCUAA--
#Opisthorchis_viverrini GGCGGUG-UU AGAGGUGAAA UUCUUGGAUC
ACCGCCAG-A CAAACUAC--
#Pellioditis_typica CCUCGGG-CG
AGGGGUGAAA UCCGUAGACC CUGAGGAG-A CGACCAAU--
#Placopecten
UACGGUG-UU AGAGGUGAAA UUCUUGGAUC GCCGUAAG-A CGAACUAC--
#Priapulus_caudatus UGCUGCG-UU
AGAGGUGAAA UUCUUGGAUC GUAGCAAG-A CGAACAAC--
#Saccharomyces_cerevisiae UCAAUUG-UC -GAGGUGAAA UUCUUGGAUU UAUUGAAG-A
CUAACUAC--
#Saccoglossus_kowalevskii UGCGGCG-UU AGAGGUGAAA UUCUUGGAUC GUCGCAA---
-GAACGAC--
#Scypha_ciliata
UCAAUUG-UC AGAGGUGAAA UUCUUGGAUU UAUGGAAG-A CGAACAAC--
#S_purpuratus
UGCGGUG-UG AGAGGUGAAA UUCUUGG-UC GCCGCAAG-A CGACCGGU--
#Tenebrio_molitor
UGCGACG-UU AGAGGUGAAA UUCUUGGAUC GUCGCAAG-A CGGACAGA--
#Xenopus_laevis
UGUGCCG-CU AGAGGUGAAA UUCUUGGACC GGCGCAAG-A CGAACCAA--
#Brachionus
UGCGAAA--G CAUU-UGCCA AGAAUGUUUU C--AUUAAUC AA-GAACGAA
#Philodina
GCAGCGA--A CGGUUCGCCA AGAAUGUUUU C--AUUAAUC AA-GAACGAA
#N_pseudemydis
UGCGAAA--G CAUU-UGCCA AGAAUGUUUU C--AUUAAUC AA-GAACGAA
#Centrorhynchus
UGCGAAA--G CAUU-UGCCA AGAAUGUUUU C--GUUAAUC AC-GAACGAA
#Moniliformis
UGCGAAA--G CAUU-UGCCA AGAAUGUUUU C--AUUAAUC AA-GAACGAA
#Acanthopleura
UGCGAAA--G CAUU-UGCCA AGAAUGUUUU C--AUUAAUC AA-GAACGAA
#Anemonia
UGCGAAA--G CAUU-UGCCA AGAAUGUUUU C--AUUAAUC AA-GAACGAA
#Anthopleura
UGCGAAA--G CAUU-UGCCA AGAAUGUUUU C--AUUAAUC AA-GAACGAA
#Artemia
UGCGAACAAG U-U--UGCCA AGAAUGUUUU C--AUUAAUC AA-GAACGAA
#C_elegans
AGCGAAA--G CAUU-UGCCA AGAAUGUCUU C--AUUAAUC AA-GAACGAA
#Eisenia_foetida
UGCGAAA--G CAUU-UGCCA AGAAUGUUUU C--AUUAAUC AA-GAACGAA
#Eurypelma
UGCGAAA--G CAUU-UGCCA AGAAUGUUUU C--AUUAAUC AA-GAACGAA
#Haemonchus_placei AGCGAAA--G
CAUU-UGCCA AGAAUGUCUU C--AUUAAUC AA-GAACGAA
#Homo_sapiens
AGCGAAA--G CAUU-UGCCA AGAAUGUUUU C--AUUAAUC AA-GAACGAA
#Lanice
?GCGAAA--G CAUU-UGCCA AGAAUGUUUU C--AUUAAUC AA-GAACGAA
#Lepidodermella
UGCG-AA--G CAUU-UGCCA AGGAUGUUUU C--AUUAAUC AA-GAACGAA
#Limicolaria_kambeul UGCGAAA--G CAUU-UGUCA
AGAAUGUUUU C--AUUAAUC AA-GAACGAA
#Mnemiopsis_leidyi UGCGAAA--G
CAUU-UGCCA AGGAUGUUUU C--AUUAAUC AA-GAACGAA
#Nematodirus_battus AGCGAAA--G
CAUU-UGCCA AGAAUGUCUU C--AUUAAUC AA-GAACGAA
#Opisthorchis_viverrini AGCGAAA--G CAUU-UGCCA AGGAUGUUUU
C--AUUGAUC UG-GAGCGAA
#Pellioditis_typica AGCGAAA--G
CAGC-UGCCA AGAAUGUCUC C--AUUAAUC AA-GAACGAA
#Placopecten
UGCGAAA--G CAUU-UGCCA AGAAUGUUUU C--AUUAAUC AA-GAUCGAA
#Priapulus_caudatus AGCGAAA--G
CAUU-UGCCA AGAAUGUUUU C--AUUAAUC AA-GAACGAA
#Saccharomyces_cerevisiae UGCGAAA--G CAUU-UGCCA AGGACGUUUU C--AUUAAUC
AA-GAACGAA
#Saccoglossus_kowalevskii UGCGAAC--G --UU-UGCCA AGAAUGUUUU C--AUUGAUC
AA-GAACGAA
#Scypha_ciliata
UGCGAAA--G CAUU-UGCCA AGGAUGUUUU C--AUUAAUC AA-GAACGAA
#S_purpuratus
AGCGAAA--- CGUU-UGCCA AGAAUGUAUU C--AUUGAUC AA-GAACGAA
#Tenebrio_molitor
AGCGAAA--G CAUU-UGCCA AAAACGCUUU C--AUUGAUC AA-GAACGAA
#Xenopus_laevis
AGCGAAA--G CAUU-UGCCA AGAAUGUUUU C--AUUAAUC AA-GAACGAA
#Brachionus
AGUUGGAGGU UCGAAGACGA UUAGAUACCG UCCUAGUUCC AACCAUAAAC
#Philodina
AGUUUGAGGU UCGAAGACGA UUAGAUACCG UCCUAGUUCA AACCAUAAAC
#N_pseudemydis
AGUUAGAGUU UCGAAGACGA UUAGAUACCG UCCUAGUUCU AACUAUAAAC
#Centrorhynchus
AGUUAGAGGA UCGAAGACGA UUAGAUACCG UCCUAGUUUU AACGGUAAAC
#Moniliformis
AGUUAGAGGU UCGAAGACGA UUAGAUACCG UCCUAGUUCU AACUAUAAAC
#Acanthopleura
AGUCAGAGGU UCGAAGACGA UCAGAUACCG UCGUAGUUCU GACCAUAAAC
#Anemonia
AGUUAGAGGC UCGAAGACGA UCAGAUACCG UCCUAGUUAU AACCAUAAAC
#Anthopleura
AGUUAGAGGC UCGAAGACGA UCAGAUACCG UCCUAGUUCU AACCAUAAAC
#Artemia
AGUUAGAGGU UCGAAGGCGA UCAGAUACCG CCCUAGUUCU AACCAUAAAC
#C_elegans
AGUCAGAGGU UCGAAGGCGA UUAGAUACCG CCCUAGUUCU GACCGUAAAC
#Eisenia_foetida
AGUCAGAGGU UCGAAGACGA UCAGAUACCG UCGUAGUUCU GACCAUAAAC
#Eurypelma
AGUUAGAGGU UCGAAGGCGA UCAGAUACCG CCCUAGUUCU AACCAUAAAC
#Haemonchus_placei AGUCAGAGGU
UCGAAGGCGA UUAGAUACCG CCCUAGUUCU GACCGUAAAC
#Homo_sapiens
AGUCGGAGGU UCGAAGACGA UCAGAUACCG UCGUAGUUCC GACCAUAAAC
#Lanice
AGUCAGAGGU UCGAAGACGA UCAGAUACCG UCGUAGUUCU GACCAUAAAC
#Lepidodermella
AGUCAGAGGU UCGAAGACGA UCAGAUACCG UCGUAGUUCU GACCAUAAAC
#Limicolaria_kambeul AGUCAGAGGC GCGAAGACGA
UCAGAUACCG UCGUAGUUCU GACCAUAAAC
#Mnemiopsis_leidyi AGUUGGAGGC
UCGAAGACGA UCAGAUACCG UCCUAGUUCC AACCAUAAAC
#Nematodirus_battus AGUCAGAGGU
UCGAAGGCGA UUAGAUACCG CCCUAGUUCU GACCGUAAAC
#Opisthorchis_viverrini AGUCAGAGGU UCGAAGACGA UCAGAUACCG
UCCUAGUUCU GACCAUAAAC
#Pellioditis_typica AGUCAGAGGU
UCGAAGGCGA UUAGAUACCG CCCUAGUUCU GACCGUAAAC
#Placopecten
AGUCAGAGGU UCGAAGACGA UCAGAUACCG UCGUAGUUCU GACCAUAAAC
#Priapulus_caudatus AGUCAGAGGU
UCGAAGGUGA UCAGAUACCG CCCUAGUUCU GACCAUAAAC
#Saccharomyces_cerevisiae AGUUAGGGGA UCGAAGAUGA UCUGGUACCG UCGUAGUCUU
AACCAUAAAC
#Saccoglossus_kowalevskii AGUCGGAGGU UCGAAGACGA UCAGAUA-CG UC-UAGUUCC
GACCGUAAAC
#Scypha_ciliata
AGUUGGAGGU UCGAAGACGA UCAGAUACCG UCGUAGUUCC AACCAUAAAC
#S_purpuratus
AGUUACAGGU UCGAAGGCGA UACGAUACCG CCCUAGUUCU AACCAUAAAC
#Tenebrio_molitor
AGUUAGAGGU UCGAAGGCGA UCAGAUACCG CCCUAGUUCU AACCAUAAAC
#Xenopus_laevis
AGUCGGAGGU UCGAAGACGA UCAGAUACCG UCGUAGUUCC GACCAUAAAC
#Brachionus
GAUGCCAACU -AGCG--AUU AGCUGCU-GU U--AUUUUUA C-GA-CACAG
#Philodina
GUUGCCAACU -GUC---UUU UAGAUGCGGU U--AUUUAUA U-GA-CUCAU
#N_pseudemydis
UAUGCCAACU -GGG--CAUC UGGCGAU-UG C--AUUA--A U-GC-AUCGG
#Centrorhynchus
UGUGCCGGCC -AGG---AAU UCGCCAA-CG C--AAUA--A --CU-UGGCG
#Moniliformis
UAUGCCAACU -GGGG--AUC CGUCGGUUGC C--AUUU-GU A-GG-CUCGG
#Acanthopleura
GAUGCCAACU -AGCG--AUC CGCCGGA-GU U--GUUUCAA U-GA-CUCGG
#Anemonia
GAUGCCGACU -AGGG--AUC AGAGAGU-GU U---AUUGGA U-GA-CCUCU
#Anthopleura
GAUGCCGACU -AGGG--AUC AGAGAGU-GU U---AUUGGA U-GA-CCUCU
#Artemia
GAUGCCAACC -AGCG--AUC CGCGGAC-GU U--ACUUGAA U-GA-CUCCG
#C_elegans
GAUGCCAUC- UCGCG--AUU CGGAGG--GU U------UUU --GC-CCUGC
#Eisenia_foetida
GAUGUCGACU -GGCG--AUC CGCGGAC-GU C--GCUUCUA U-GA-CCCCG
#Eurypelma
GAUGCCAACC -AGCG--AUC CGCCUGA-GU U--CCUCAAA U-GA-CUCGG
#Haemonchus_placei UAUGCCAUCU
-AGCG--AUC CGAUGG--GG U---AUAGUU --GC-CUUGU
#Homo_sapiens
GAUGCCGACC -GGCG--AUG CGGCGGC-GU U--AUUCCCA U-GA-CCCGC
#Lanice
GAUGCCAACU -AUCG--AUC CGUCGGC-GU U--GACAUCA A-GA-CCCUG
#Lepidodermella
GAUGCCAACU -GCGG--AUC C--CGUA-GU CUGGCUUAAA G-GA-CUCGG
#Limicolaria_kambeul GAUGCCGACU -AGCG--AUC
CGCAGG--AG UU-GCUUCGA U-GA-CUCUG
#Mnemiopsis_leidyi GAUGCCGUCU
-GCGG--AUC GGAGGUC-GC U---CAAUUA A-GG-CUCCU
#Nematodirus_battus UAUGCCAUCU
-AGCG--AUC CGAUGG--GG U---AUAUUU --GC-CUUGU
#Opisthorchis_viverrini GAUGCCAACU -GACG--AUC CGUG-GU-GG
C-GCGAUUAU UGGC--CCCG
#Pellioditis_typica UAUACCAGCU
CAUGA--CU- ------A-GU UGGGAUGUAA U-GUCCACAA
#Placopecten
GAUGCCAACU -AGCG--AUC CGCCGGA-GU U--GCUUCAA U-GA-CUCGG
#Priapulus_caudatus GAUGCCAACU
-AGCG--AUC CGCCGG--AG UU-ACUACAA U-GA-CUUGG
#Saccharomyces_cerevisiae UAUGCCGACU -AG----AUC GGGUGGU-GU U--UUUUUAA
U-GA-CCCAC
#Saccoglossus_kowalevskii GAUGCCGACU ---CG--AUC UGCGGC--GU U--ACUCUCU
A-GA-CCCGG
#Scypha_ciliata
GAUGCCGACU -AGGG--AUC GGUGGAU-GU U---AUUAAA U-GA-CUCCA
#S_purpuratus
UAUGCCGACC --GCG--AU- UGCCG-C-GU U--AUAUCAA U-GA-CACGG
#Tenebrio_molitor
GAUGCCAGCU -AGCG--AUC CGCCGAC-GU U--CCUCCGA U-GA-CUCGG
#Xenopus_laevis
GAUGCCGACU -AGCG--AUC CGGCGGC-GU U--AUUCCCA U-GA-CCCGC
#Brachionus
CUAGC-AGCU UC---CGGGA AACCA--AAG UUUUUGGGUU CCGGGGG-AA
#Philodina
CUGGC-GGAU CU---CGAGA AAUCU--AAG UUUUUAGGUU CCGGGGG-AA
#N_pseudemydis
CAGGC---AC UA---CGGGA AACCA--AAG UUAUUGGGUU CCGGGGG-GA
#Centrorhynchus
AGCGC---UU UC---CGGGA AACCA--AAG CUAUUUGGUU CCGGGGA-GA
#Moniliformis
CGGGC-ACCC UA---CGGGA AACCA--AAG UGAACAGGUU CCGGGGG-GA
#Acanthopleura
CGGGC-AGCU UC---CGGGA AACCA--AAG UUUGUGGGUU CCGGGGG-AA
#Anemonia
UUGGC-ACCU UA---GGGGA AACCA--AAG UUUUUGGGUU UCGGGGG-GA
#Anthopleura
UUGGC-ACCU UA---UGG-A AACCA--AAG UUUUUGGGUU CCGGGG--AA
#Artemia
CGGGC-AGCU UC---CGGGA AACCA--AAG UGUUUGGGUU CCGGGGG-AA
#C_elegans
CGAGG-AGCU A---UCCGGA AACGA--AAG UCUUUCGGUU CCGGGGG-UA
#Eisenia_foetida
CGGGC-AGCC UU---CGGGA AACCA--AAG UCUAUGGAUU CCGGGGG-AA
#Eurypelma
CGGGC-AGCU UC---CGGGA AACCA--AAG UGUUUGGGUU CCGGGGG-AA
#Haemonchus_placei CGAGG-AGCU
UC---CCGGA AACGA--AAG UCUUUCGGUU CCUGGGG-UA
#Homo_sapiens
CGGGC-AGCU UC---CGGGA AACCA--AAG UCUUUGGGUU CCGGGGG-GA
#Lanice
CGGGC-AGCU UC---CGGGA AACCA--AAG UUUUUGGGUU CCGGGGG-AA
#Lepidodermella
CGGGC-AGCU -C---CGGGA AACCU--AAG UCUAUGGGUU CCGGGGG-GA
#Limicolaria_kambeul CGGGC-AGCU UC---CGGGA
AACCA--AAG UUUUUGGGUU CCGGGGG-AA
#Mnemiopsis_leidyi UCGGC-ACGC
UA---UGAGA AAUCA--AAG ACUUCGGGUU CCGGGGG-GA
#Nematodirus_battus CGAGG-AGCU
UC---CCGGA AACGA--AAG UCUUUCGGUU CCUGGGG-UA
#Opisthorchis_viverrini CGGGC-AGCC CC---CGGGA AACCUUUAAG
UCUUUGGGCU CCGGGGG-AA
#Pellioditis_typica CGGGUCUGAU
-----CCGGA AACGA--AAG -CUUUCGGUU CCGGGGG-GA
#Placopecten
CGGGC-AGCU UA---CGGGA AACCA--AAG UUUUUGGGUU CCGGGGG-AA
#Priapulus_caudatus CGGGC-AGCU
AC---CGGGA AACCA--AAG UCUUUGGGUU CCGGGGG-AA
#Saccharomyces_cerevisiae UCGGU-ACCU UA---CGAGA AAUCA--AAG UCUUUGGGUU
CUGGGGG-GA
#Saccoglossus_kowalevskii CG--C-AGCU -C---CGG-A AACCA--AAG UCUUUGGGUU
CCGGGGG-AA
#Scypha_ciliata
UCGGC-ACCU UA---UGAGA AAUCA--AAG UUUUUGGGUU CCGGGGG-GA
#S_purpuratus
CAAGC-AGCU UC---CGGGA AACCA--AAG UUUUUGGGUU CCGGGGG-AA
#Tenebrio_molitor
CGGGC-AGCU UC---CGGGA AACCA--AAG CUUUUGGGUU CCGGGGG-AA
#Xenopus_laevis
CGAGC-AGCU UC---CGGGA AACCA--AAG UCUUUGGGUU CCGGGGG-GA
#Brachionus
GUAUGGUUGC AAAGCU-GAA ACUUAAAGGA A-UUGACGGA AGGGGCACCA
#Philodina
GUAUGGUUGC AAAGCU-GAA ACUUAAAAGA A-UUGACGGA AGGACACACA
#N_pseudemydis
GUAUGGUUGC AAAAUC-GAA ACUUAAAGGA A-UUGACGGA -GGGGCA-CA
#Centrorhynchus
GUAUGGUUGC AAAAUC-GAA ACUUAAAGGA A-UUGACGGA -GGGGCA-CA
#Moniliformis
GUAUGGUUGC AAAAUC-GAA ACUUAAAGGA A-UUGACGGA -GGGGCA-CA
#Acanthopleura
GUAUGGUUGC AAAGCU-GAA ACUUAAAGGA A-UUGACGGA A-GGGCACCA
#Anemonia
GUAUGGUUGC AAAGCU-GAA ACUUAAAGGA A-UUGACGGA A-GGGCACCA
#Anthopleura
GUAUGGUUGC AAAGCU-GAA ACUUAAAGGA A-UUGACGGA A-GGGCACCA
#Artemia
GUAUGGUUGC AAAGCU-GAA ACUUAAAGGA A-UUGACGGA A-GGGCACCA
#C_elegans
GUAUGGUUGC AAAGCU-GAA ACUUAAAGAA A-UUGACGGA A-GGGCACCA
#Eisenia_foetida
GUAUGGUUGC AAAGCU-GAA ACUUAAAGGA A-UUGACGGA A-GGGCACCA
#Eurypelma
GUAUGGUUGC AAAGCU-GAA ACUUAAAGGA A-UUGACGGA A-GGGCACCA
#Haemonchus_placei GUAUGGUUGC
AAAGCU-GAA ACUUAAAGAA A-UUGACGGA A-UGGCACCA
#Homo_sapiens
GUAUGGUUGC AAAGCU-GAA ACUUAAAGGA A-UUGACGGA A-GGGCACCA
#Lanice
GUAUGGUUGC AAAGCU-GAA ACUUAAAGGA A-UUGACGGA A-GGGCACCA
#Lepidodermella
GUAUGGUUGC AAAGCU-GAA ACUUAAAGGA A-UUGACGGA A-GGGCACCA
#Limicolaria_kambeul GUAUGGUUGC AAAGCU-GAA
ACUUAAAGGA A-UUGACGGA A-GGGCACCA
#Mnemiopsis_leidyi GUAUGUUCGC
AAGAAU-GAA ACUUAAAGGA A-UUGACGGA A-GGGCACCA
#Nematodirus_battus GUAUGGUUGC
AAAGCU-GAA ACUUAAAGAA A-UUGACGGA A-UGGCACCA
#Opisthorchis_viverrini GUAUGGUUGC AAAGCU-GAA ACUUAAAGGA
A-UUGACGGA A-GGGCACCA
#Pellioditis_typica GUAUGGUUGC
AAAGCU-GAA ACUUAAAGAA A-UUGACGGA A-GGGCACCA
#Placopecten
GUAUGGUUGC AAAGCU-GAA ACUUAAAGGA A-UUGACGGA A-GGGCACCA
#Priapulus_caudatus GUAUGGUUGC
AAAGCU-GAA ACUUAAAGGA A-UUGACGGA A-GGGCACCA
#Saccharomyces_cerevisiae GUAUGGUCGC AAGGCU-GAA ACUUAAAGGA A-UUGACGGA
A-GGGCACCA
#Saccoglossus_kowalevskii GUAUGGUUGC AAAGCU-GAA ACUUAAAGGA A-UUGACGGA
A-GGGCACCA
#Scypha_ciliata
GUAUAAUCGC AAGAUC-GGA ACUUAAAGGA A-UUGACGGA A-GGGCACCA
#S_purpuratus
GUAUGGUUGC AAAGCU-GAA ACUUAAAGGA A-UUGACGGA A-GGGCACCA
#Tenebrio_molitor
GUAUGGUUGC AAAGCU-GAA ACUUAAAGGA A-UUGACGGA A-GGGCACCA
#Xenopus_laevis
GUAUGGUUGC AAAGCU-GAA ACUUAAAGGA A-UUGACGGA A-GGGCACCA
#Brachionus
CCAGGAGUGG UAGCC-UGCG -CUUAAUUUG ACUCAACACG GGAAAUCUCA
#Philodina
--AGAAGUG- GAGCC-UGUG GCCUAAUUUG ACUCAACACG GGAAACCUUA
#N_pseudemydis
CCAGAAGUG- GAGCC-UGCG GCUCAAUUUG ACUCAACGCA CGAAAACUUA
#Centrorhynchus
CCAGGAGUG- GAGCC-UGCG GCUCAAUUUG ACUCAACGCA CGAAAGCUUA
#Moniliformis
CCAGAAGUG- GAGCC-UGCG GCUCAAUUUG ACUCAACGCA CGAAAACUUA
#Acanthopleura
CCAGGAGUG- GAGCC-UGC- GCUUAAUUUG ACUCAACACG GGAAAACUCA
#Anemonia
CCAGGAGUG- GAGCC-UGC- GCUUAAUUUG ACUCAACACG GGGAAACUCA
#Anthopleura
CCAGGAGU?- ?GGCA-UGCG GCUUAAUUUG ACUCAACACG GGGAAACUCA
#Artemia
CCAGGAGUG- GAGCC-UGCG GCUUAAUUUG ACUCAACACG GGAAACCUCA
#C_elegans
CAAGGCGUG- GAGCU-UGCG GCUUAAUUUG ACUCAACACG GGAAAACUCA
#Eisenia_foetida
CCAGGAGUG- GAGCC-UGCG GCUUAAUUUG ACUCAACACG GGAAAACUCA
#Eurypelma
CCAGGAGUG- GAGCC-UGCG GCUUAAUUUG ACUCAACACG GGAAACCUUA
#Haemonchus_placei CCAGGAGUG-
GAGCC-UGCG GCUUAAUUUG ACUCAACACG GGAAAACUCA
#Homo_sapiens
CCAGGAGUG- GAGCC-UGCG GCUUAAUUUG ACUCAACACG GGAAACCUCA
#Lanice
CCAGGAGUG- GAGCC-UGCG GCUUAAUUUG ACUCAACACG GGAAAACUCA
#Lepidodermella
CCAGGAGUG- GAGCC-UGCG GCUUAAUUUG ACUCAACACG GGAAAACUCA
#Limicolaria_kambeul CCAGGAGUG- GAGCC-UGC-
GCUUAAUUUG ACUCAACACG GGAAAACUCA
#Mnemiopsis_leidyi CCAGGAGUG-
GAACC-UGCG GUUUAAUUUG ACUCAACACG GGAAAACUCA
#Nematodirus_battus CCAGGAGUG-
GAGCC-UGCG GCUUAAUUUG ACUCAACACG GGAAAACUCA
#Opisthorchis_viverrini CCAGGAGUG- -GCAG-UGCG GCUUAAUUCG
ACUCAACACG GGAAAUCUCA
#Pellioditis_typica CCAGGAGUG-
GAGCC-UGCG GCUUAAUUAG ACUCAACACU GGGAAGCUCA
#Placopecten
CCAGGAGUG- GAGCC-UGC- GCUUAAUUUG ACUCAACACG GGAAAACUCA
#Priapulus_caudatus CCAGGAGUG-
GAGCC-UGCG GCUUAAUUUG ACUCAACACG GGAAAUCUCA
#Saccharomyces_cerevisiae CUAGGAGUG- GAGCC-UGCG GC-UAAUUUG ACUCAACACG
GGGAAACUCA
#Saccoglossus_kowalevskii CCAGGAGUG- -AGC--UGCG -CUUAAUUUG ACUCAACACG
GGAAAACUCA
#Scypha_ciliata
CCAGGAGUG- GAGCC-UGCG GCUUAAUUUG ACUCAACACG GGAAAACUCA
#S_purpuratus
CCAGGAGUG- -AGC--UGC- GCUUAAUUUG ACUCAACACG GGAAAACUCA
#Tenebrio_molitor
CCAGGAGUG- GAGCC-UGCG GCUUAAUUUG ACUCAACACG GGAAACCUCA
#Xenopus_laevis
CCAGGAGUG- GAGCC-UGCG GCUUAAUUUG ACUCAACACG GGAAACCUCA
#Brachionus
CCCGGCCCGG ACA-CUGUAA GGAUUGACAG -A-UUGAGAG CUCUUUCUUG
#Philodina
CUCGGCCAGG ACA-CUUUUA GGAUUGACAG -A-UUGAGAG CUCUUUCUUG
#N_pseudemydis
CUCGGUCCGA ACA-CCGUGA GGAUUGACAG -G-UUGAAAG CUCUUUCUUG
#Centrorhynchus
CUCGGUCCGA ACA-CUGUGA GGAUUGACAG -G-CUGAAAG CUCUUUCUUG
#Moniliformis
CCCGGCCCGA ACA-CCGUGA GGAUUGACAG -A-UUGACAG CUCUUUCUUG
#Acanthopleura
CCCGGCCCGG ACA-CUGUAA GGAUUGACAG -A-UUGAGAG CUCUUUCUUG
#Anemonia
CCAGGUCCAG ACA-UAGGAA GGAUUGACAG -A-UUGAGAG CUCUUUCUUG
#Anthopleura
CCAGGUCCAG ACA-UAGGAA GGAUUGACAG -A-UUGAGAG CUCUUUCUUG
#Artemia
CCAGGCCCGG ACA-CUGGAA GGAUUGACAG -A-UUGAGAG CUCUUUCUUG
#C_elegans
CCCGGUCCGG ACA-CCAUUA GGACUGACAG -A-UUGAAAG CUCUUUCUCG
#Eisenia_foetida
CUCGGCCCGG ACUACUGCAA GGAUUGACAG -A-UUGAGAG CUCUUUCUUG
#Eurypelma
CCCGGCCCGG ACA-CUGGAA GGAUUGACAG -A-UUAAGAG CUCUUUCUUG
#Haemonchus_placei CCCGGCCCGG
ACA-CCGUAA -GAUUGACAG -A-UUGAAAG CUCUUUCUCG
#Homo_sapiens
CCCGGCCCGG ACA-CGGACA GGAUUGACAG -A-UUGAUAG CUCUUUCUCG
#Lanice
CCCGGCCCGG ACA-CCGUAA GGAUUGACAG -A-UUGAGAG CUCUUUCUUG
#Lepidodermella
CCCGGCCAGG ACA-CCGUUA GGAUUGACAG -A-CUGAGAG CUCUUUCUUG
#Limicolaria_kambeul CCCGGUCCGG ACA-CUGUAA
GGAUUGACAG -A-UUGAUAG CUCUUUCUUG
#Mnemiopsis_leidyi CCAGGUCCAG
ACA-UAGGAA GGAUUGACAG -A-UUGAGAG CUCUUUCUUG
#Nematodirus_battus CCCGGCCCGG
ACA-CCGUA- AGAUUGACAG -A-UUGAAAG CUCUUUCUCG
#Opisthorchis_viverrini CCCGGCCCGG ACA-CUGUGA GGAUUGACAG
-A-UUGAUAG CUCUUUCUUG
#Pellioditis_typica CCCGGUCUGG
ACA-CUAUGA GGAUUGACGG -AACUCGAAG CUCCUUCUCG
#Placopecten
CCCGGCCCGG ACA-CUGUAA GGAUUGACAG -A-UUGAGAG CUCUUUCUUG
#Priapulus_caudatus CCCGGUCCGG
ACA-CUGUAA GGAUUGACAG -A-UUGAGAG CUCUUUCUUG
#Saccharomyces_cerevisiae CCAGGUCCAG ACA-CAAUAA GGAUUGACAG -A-UUGAGAG
CUCUUUCUUG
#Saccoglossus_kowalevskii CCCGGCCCGG ACA-CGGCGA GGAUUGACAG -A-UUGAGAG
CUCUUUCUUG
#Scypha_ciliata
CCAGGUCCAG ACA-UAGUAA GGAUUGACAG -A-UUGAGAG CUCUUUCUUG
#S_purpuratus
CCCGGCCCGG ACA-CAGUAA GGAUUGACAG -A-UUGAGAG CUCUUUCUUG
#Tenebrio_molitor
CCAGGCCCGG ACA-CCGGAA GGAUUGACAG -A-UUGAGAG CUCUUUCUUG
#Xenopus_laevis
CCCGGCCCGG ACA-CGGAAA GGAUUGACAG -A-UUGAUAG CUCUUUCUCG
#Brachionus
AUUCGGUGGG UGGUGGUGCA UGG--GUU-C UUAGUUGGAU GGAG-CGAUU
#Philodina
AUUAGGUGGG UGGUGGUGCA UGGCCGUU-C GUAGUUCG-U GGAG-CGAUU
#N_pseudemydis
AUUCGGUGGG UGGUGGUGCA UGGCCGUU-C GUAGUUGG-U GGAG-UGAUU
#Centrorhynchus
AUUCAGUGGG UAGCGGUGCA UGGCCGUU-C GUAGUCCG-U GAAG-CGAUU
#Moniliformis
AUUCGGUGGG UGGUGGUGCA UGGCCGUU-C GUAGUUGG-U GGAG-CGAUU
#Acanthopleura
AUUCGGUGGG UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-CGAUU
#Anemonia
AUUCUAUGGG UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-UGAUU
#Anthopleura
AUUCUAUGGG UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-UGAUU
#Artemia
AUUCAGUGGG UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-CGAUU
#C_elegans
AUUUGGUGGU UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-UGAUU
#Eisenia_foetida
AUUCGGUGGG UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-CGAUU
#Eurypelma
AUUCAGUGGG UGGUGGUGCA UGGCCGUU-C AUAGUUGG-U GGAG-CGAUU
#Haemonchus_placei AUUUGGUGGU
UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-CGAUU
#Homo_sapiens
AUUCCGUGGG UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-CGAUU
#Lanice
AUUCGGUGGG UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-CGAUU
#Lepidodermella
AUUCGGUGGG UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-CGAUU
#Limicolaria_kambeul AUUCGGUGGG UGGUGGUGCA
UGGCCGUU-C UUAGUUGG-U GGAG-CGAUU
#Mnemiopsis_leidyi AUUCUAUGGG
UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-UGAUU
#Nematodirus_battus AUUUGGUGGU
UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-CGAUU
#Opisthorchis_viverrini AUUCGGUGGU UGGUGGUGCA UGGCCGUU-C
UUAGUUGG-U GGAG-CGAUU
#Pellioditis_typica AUUUAGUGGC
UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-UGAUC
#Placopecten
AUUCGGUGGG UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-CGAUU
#Priapulus_caudatus AUUCGGUGGG
UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-CGAUU
#Saccharomyces_cerevisiae AUUUUGUGGG UGGUGGUGCA UGGCCGUUUC UCAGUUGG-U
GGAG-UGAUU
#Saccoglossus_kowalevskii AUUUGGUGGG UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U
GGAG-CGAUU
#Scypha_ciliata
AUUCUAUGGG UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-UGAUU
#S_purpuratus
AUUCUGUGGG UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-UGAUU
#Tenebrio_molitor
AUUCGGUGGG UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-CGAUU
#Xenopus_laevis
AUUCUGUGGG UGGUGGUGCA UGGCCGUU-C UUAGUUGG-U GGAG-CGAUU
#Brachionus
UGUCUGGUUA AUUCCGAUAA CGAACGAGAC UCUAGCCUGC UAAAUAGUAC
#Philodina
UGUCUGAUUA AUUUCGAUAA CGAACGAGAC UCCGGCUUAC UAAAUAGUCU
#N_pseudemydis
UGUCUGGUUU AUUCCGAUAA CGAACGAGAC UCUAGCCUAU UAAUUAGUGA
#Centrorhynchus
UGUCUGGUUG AUUCCGAUAA CGAACGAGAC UC-GGCCUAC UAAUUAAAGU
#Moniliformis
UGUCUGGUUU AUUCCGAUAA CGAACGAGAC UCUAGCCUAU UAAUUAGGGU
#Acanthopleura
UGUCUGGUUA AUUCCGAUAA CGAACGAGAC UCUAGCCUAU UAAAUAGUUC
#Anemonia
UGUCUGGUUA AUUCCGUUAA CGAACGAGAC CUUAACCUGC UAAAUAGUUA
#Anthopleura
UGUCUGGUUA AUUCCGUUAA CGAACGAGAC CUUAACCUGC UAAAUAGUUA
#Artemia
UGUCUGGUUA AUUCCGAUAA CGAACGAGAC UCUAGCCUGC UAAAUAGACG
#C_elegans
UGUCUGGUUU AUUCCGAUAA CGAGCGAGAC UCUAGCCUGC UAAAUAGUUG
#Eisenia_foetida
UGUCUGGUUA AUUCCGAUAA CGAACGAGAC UCUAGCCUGC UAAAUAGUUC
#Eurypelma
UGUCUGGUUU AUUCCGAUAA CGAACGAGAC UCUAGCCUAC UAAAUAGGCG
#Haemonchus_placei UGUCUGGUUU
AUUCCGAUAA CGAGCGAGAC UCUAGCCUGC UAAAUAGUGG
#Homo_sapiens
UGUCUGGUUA AUUCCGAUAA CGAACGAGAC UCUGGCAUGC UAACUAGUUA
#Lanice
UGUCUGGUUA AUUCCGAUAA CGAACGAGAC UCUAGCCUGC UAAAUAGUUC
#Lepidodermella
UGUCUGGUUA AUUCCGAUAA CGAACGAGAC UCUAGCCUGC UAAAUAGACG
#Limicolaria_kambeul UGUCUGGUUA AUUCCGAUAA
CGAACGAGAC UCUAGCCUAU UAAAUAGUUC
#Mnemiopsis_leidyi UGUCUGGUUA
AUUCCGUUAA CGAACGAGAC CUUAACCUGC UAAAUAGUGA
#Nematodirus_battus UGUCUGGUUU
AUUCCGAUAA CGAGCGAGAC UCUAGCCUGC UAAAUAGUGC
#Opisthorchis_viverrini UGUCUGGUUA AUUCCGAUAA CGAACGAGAC
UUUGGCCUGC UAAAUAGUAC
#Pellioditis_typica UGUCUGGUUU
AUUCCGGUAA CGAUCGAGAC UCUAGCCAAC UCAAUAGUUA
#Placopecten
UGUCUGGUUA AUUCCGAUAA CGAACGAGAC UCUAGCCUGC UAAAUAGUUC
#Priapulus_caudatus UGUCUGGUUA
AUUCCGAUAA CGAACGAGAC UCUGGCCUAC UAAAUAGUGA
#Saccharomyces_cerevisiae UGUCUGCUUA AUUGCGAUAA CGAACGAGAC CUUAACCUAC
UAAAUAGUGG
#Saccoglossus_kowalevskii UGUCAGGUUG AUUCCGAUAA CGAACGAGAC UCUGGCUUGC
UAAAUAGUCG
#Scypha_ciliata
UGUCUGGUUA AUUCCGUUAA CGAACGAGAC CUUAACCUGC UAAAUAGUUA
#S_purpuratus
UGUCUGGUUA AUUCCGAUAA CGAACGAGAC UCUGGCUUGC UAAAUAGUUG
#Tenebrio_molitor
UGUCUGGUUA AUUCCGAUAA CGAACGAGAC UCUAGCCUGC UAAAUAGGCG
#Xenopus_laevis
UGUCUGGUUA AUUCCGAUAA CGAACGAGAC UCCUCCAUGC UAACUAGUUA
#Brachionus
GU-CGAUCU- ---------- ---------- ---------- ----------
#Philodina
AA-AGUUC-- ---------- ---------- ---------- ----------
#N_pseudemydis
GA-CGAGCGA ---------- ---------- ---------- ----------
#Centrorhynchus
AG-CGA---- ---------- ---------- ---------- ----------
#Moniliformis
GC-CGAUU-- ---------- ---------- ---------- ----------
#Acanthopleura
GC-CGAUC-- ---------- ---------- ---------- ----------
#Anemonia
CG-CCCAU-- ---------- ---------- ---------- ----------
#Anthopleura
CG-?UCGU-- ---------- ---------- ---------- ----------
#Artemia
AU-GGAUCC- ---------- ---------- ---------- ----------
#C_elegans
GC-GAAUCUU C--------- ---------- ---------- ----------
#Eisenia_foetida
GU-CGAUGGC A--------- ---------- ---------- ----------
#Eurypelma
UCCCGAUCA- ---------- ---------- ---------- ----------
#Haemonchus_placei CU-GGAUUUU
U--------- ---------- ---------- ----------
#Homo_sapiens
CG-CGACCC- ---------- ---------- ---------- ----------
#Lanice
GU-UCAUAUC UG-------- ---------- ---------- ----------
#Lepidodermella
GG-CGAUCCG ---------- ---------- ---------- ----------
#Limicolaria_kambeul GC-CGGUUC- ----------
---------- ---------- ----------
#Mnemiopsis_leidyi CA-CGGUU--
---------- ---------- ---------- ----------
#Nematodirus_battus CU-GGAUUUU
UA-------- ---------- ---------- ----------
#Opisthorchis_viverrini GC-CUGUCCU CUGUGCUCGU GCAGGUGGCG
GUGCUCAUUG CCUCUCU---
#Pellioditis_typica CU-GGAUCGC
---------- ---------- ---------- ----------
#Placopecten
AC-CGAUCCG ---------- ---------- ---------- ----------
#Priapulus_caudatus GC-CGAUUC-
---------- ---------- ---------- ----------
#Saccharomyces_cerevisiae UG-CUAGCA- ---------- ---------- ----------
----------
#Saccoglossus_kowalevskii UG-CGACCC- ---------- ---------- ----------
----------
#Scypha_ciliata
CG-CGAUU-- ---------- ---------- ---------- ----------
#S_purpuratus
CG-CCACCC- ---------- ---------- ---------- ----------
#Tenebrio_molitor
UA-UUUCGAC AUCCCAAAGG CCCGCUGGUC CCGGGUUCG- -------CUC
#Xenopus_laevis
CG-CGACCC- ---------- ---------- ---------- ----------
#Brachionus
---------- ---------- ---------- ---------- ----------
#Philodina
---------- ---------- ---------- ---------- ----------
#N_pseudemydis
---------- ---------- ---------- ---------- ----------
#Centrorhynchus
---------- ---------- ---------- ---------- ----------
#Moniliformis
---------- ---------- ---------- ---------- ----------
#Acanthopleura
---------- ---------- ---------- ---------- ----------
#Anemonia
---------- ---------- ---------- ---------- ----------
#Anthopleura
---------- ---------- ---------- ---------- ----------
#Artemia
---------- ---------- ---------- ---------- ----------
#C_elegans
---------- ---------- ---------- ---------- ----------
#Eisenia_foetida
---------- ---------- ---------- ---------- ----------
#Eurypelma
---------- ---------- ---------- ---------- ----------
#Haemonchus_placei ----------
---------- ---------- ---------- ----------
#Homo_sapiens
---------- ---------- ---------- ---------- ----------
#Lanice
---------- ---------- ---------- ---------- ----------
#Lepidodermella
---------- ---------- ---------- ---------- ----------
#Limicolaria_kambeul ---------- ----------
---------- ---------- ----------
#Mnemiopsis_leidyi ----------
---------- ---------- ---------- ----------
#Nematodirus_battus ----------
---------- ---------- ---------- ----------
#Opisthorchis_viverrini ---------- ---------- ----------
---------- ----------
#Pellioditis_typica ----------
---------- ---------- ---------- ----------
#Placopecten
---------- ---------- ---------- ---------- ----------
#Priapulus_caudatus ----------
---------- ---------- ---------- ----------
#Saccharomyces_cerevisiae ---------- ---------- ---------- ----------
----------
#Saccoglossus_kowalevskii ---------- ---------- ---------- ----------
----------
#Scypha_ciliata
---------- ---------- ---------- ---------- ----------
#S_purpuratus
---------- ---------- ---------- ---------- ----------
#Tenebrio_molitor
GGUGACCGUG CGC-GGUU-- ---------- ---------- ----------
#Xenopus_laevis
---------- ---------- ---------- ---------- ----------
#Brachionus
---------- ---------- ---------- ---------- ------UUAG
#Philodina
---------- ---------- ---------- ---------- ----GAAGGG
#N_pseudemydis
---------- ---------- ---------- --ACCGCUUU UGCGGCGAUG
#Centrorhynchus
---------- ---------- ---------- ---------- ---UCUGUUG
#Moniliformis
---------- ---------- ---------- ---------- CAAUUAGUCG
#Acanthopleura
---------- ---------- ---------- --------CC UGAUGCGUCG
#Anemonia
---------- ---------- ---------- ---------- -CGCGAUGGG
#Anthopleura
---------- ---------- ---------- ---------- -CUCGACGGG
#Artemia
---------- ---------- ---------- -------UAG UGGU-GG-AU
#C_elegans
---------- ---------- ---------- ---------- ----GGGUUC
#Eisenia_foetida
---------- ---------- ---------- ---------- --CUCUGUCG
#Eurypelma
---------- ---------- ---------- -------CUU CUGUCGGGC-
#Haemonchus_placei ----------
---------- ---------- ---------- ----GAGUCC
#Homo_sapiens
---------- ---------- ---------- -----CCGAG CGGUCGGCGU
#Lanice
---------- ---------- ---------- ---------- ----UUGUGA
#Lepidodermella
---------- ---------- ---------- ------CUUG CGGGUCGACU
#Limicolaria_kambeul ---------- ----------
---------- ---------C UCGAUCGCCG
#Mnemiopsis_leidyi ----------
---------- ---------- ---------- CUUUGAACCG
#Nematodirus_battus ----------
---------- ---------- ---------- ------CGUC
#Opisthorchis_viverrini ---------- ---GGGGUGA UGGUGCCGUU
CGCCGGCGGG UGCGGC-CAG
#Pellioditis_typica ----------
---------- ---------- ---------- -------AAG
#Placopecten
---------- ---------- ---------- ---------- CUCUGCGUCG
#Priapulus_caudatus ----------
---------- ---------- ---------- -----CGUCG
#Saccharomyces_cerevisiae ---------- ---------- ---------- ----------
--UUUGCUGG
#Saccoglossus_kowalevskii ---------- ---------- ---------- ----UUAACG
UUGUCGGCGA
#Scypha_ciliata
---------- ---------- ---------- ---------- -CUCGAAUCG
#S_purpuratus
---------- ---------- ---------- ------GCCG AGGUGGGCGA
#Tenebrio_molitor
---------- ---------- ---------- ----UUUACU GUCGGCGUAC
#Xenopus_laevis
---------- ---------- ---------- -----CCG-G CGGUCGGCGU
#Brachionus
UCGGGUGGGU ACUUCUUAGA GGGACAAGUA -GC---GG-- -UAA-GCUAC
#Philodina
ACUUUUCAAG ACUUCUUAGC AGGAUAAGUG -GCACUUU-- -UUAAGCCAC
#N_pseudemydis
CCGUUCAUUC ACUUCUUAGA GGGACAAGUG -UC----G-- -UGA-GACAC
#Centrorhynchus
UCGCUACAAU GAUUAUUAAA GGGACAGGUG -CU---UU-- -CUA-AGCAC
#Moniliformis
GCAUUGUUAA ACUUCUUAGA GG-ACAGGUG -CU---UC-- -UUA-AGCAC
#Acanthopleura
GC----GCCA ACUUCUUAGA GGGACAAGUG -GC---GU-- -UUA-GCCAC
#Anemonia
CAA----CUA ACUUCUUAGA GGGACUGUUG -GU---GU-- -UUA-ACCAA
#Anthopleura
CGG----CUA ACUUCUUAGA GGGACUGUUG -GU---GU-- -UUA-ACCAA
#Artemia
-------CGC UCUUCUUAGA GGGACAAGUG -GC---GU-- -CUA-GCCAU
#C_elegans
GU-----AUA ACUUCUUAGA GGGAUAAGCG -GU---GU-- -UUA-GCCGC
#Eisenia_foetida
GC----GCUA ACUUCUUAGA GGGACAAGUG -GC---GU-- -UCA-GUCAC
#Eurypelma
--------GU UCUUCUUAGA GGGACAAAUG -GC---GU-- -UUA-GCCGC
#Haemonchus_placei AG-----UCU
ACUUCUUAGA GGGAUAAGCG -GU---GU-- -UUA-GCCGC
#Homo_sapiens
CC----CCCA ACUUCUUAGA GGGACAAGUG -GC---GU-- -UCA-GCCAC
#Lanice
AC----GUUA ACUUCUUAGA GGGACAAGUG -GC---GU-- -UUA-GCCAC
#Lepidodermella
CG----AUUU GCUUCUUAGA GGGACAAGUG -GC---GU-U CCUA-GCCAC
#Limicolaria_kambeul GC----G-CA ACUUCUUAGA
GGGACGAGUG -GC---GU-- -UUA-GCCA-
#Mnemiopsis_leidyi UGG----CUC
ACUUCUUAGA GGGACUAUCG -GU---UU-- -CAA-ACCGA
#Nematodirus_battus CA----GUCU
ACUUCUUAGA GGGAUAAGCG -GU---GU-- -UUA-GCCGC
#Opisthorchis_viverrini GU----GUCU ACUUCUUAGA GGGACAAGCG
-GC---GU-- -GCCAGUCGC
#Pellioditis_typica GAUCCAGGUA
ACUUCUUAGA GGGAUUAGUG -GC---GU-- -UUA-GUCAC
#Placopecten
GU----G-CA ACUUCUUAGA GGGACAAGUG -GC---GU-- -UUA-GCCAC
#Priapulus_caudatus GUCUGGCGGC
ACUUCUUAGA GGGACAAGCG -GC---GG-- -CUA-GCCGC
#Saccharomyces_cerevisiae UUA----UCC ACUUCUUAGA GGGACUAUCG -GU---UU--
-CAA-GCCGA
#Saccoglossus_kowalevskii ------CCGA ACUUCUUAGA GGGACAAGCG -GC---GU--
-U----CC--
#Scypha_ciliata
CGG----CCA ACUUCUUAGA GGGACUAUUG -GU---GU-- -UUA-ACCGA
#S_purpuratus
--------CA ACUUCUUAGA GGGACUAGUG -GC---GU-- -UUA-GCCAC
#Tenebrio_molitor
AAA---CAAU UCUUCUUAGA GGGACAGGCG -GC---UU-- -CUA-GCCGA
#Xenopus_laevis
-------CCA ACUUCUUAGA GGGACAAGUG -GC---GU-- -UCA-GCCAC
#Brachionus
ACGA-AAUU- -GAG-CAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUUCGG
#Philodina
ACGA-AAUG- -GAG-CAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUCCGA
#N_pseudemydis
UCGA-AGUU- -GAG-CAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUUCGG
#Centrorhynchus
?CGA-AGUU- -GAG-CAAUA ACAGGUCUGU GAUGCCCUUC GA-AGUUCGA
#Moniliformis
ACGA-AGAG- -GAG-CAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUUCGG
#Acanthopleura
ACGA-AAUU- -GAG-CAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUUCGG
#Anemonia
AGUC-AGG-- -AAGGCAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUUCUG
#Anthopleura
AGUC-AGG-- -AAGGCAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUUCUG
#Artemia
AUGA-GAGU- -GAG-CAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUCCUG
#C_elegans
ACGA-GAUU- -GAG-CGAUA ACAGGUCUGU GAUGCCCUUA GA-UGUCCGG
#Eisenia_foetida
ACGA-GAUU- -GAG-CAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUUCGG
#Eurypelma
ACGA-GACA- -GAG-CAAUA ACAGGUCUGA GAUGCCCUUA GA-UGUCCGG
#Haemonchus_placei ACGA-GAUU-
-GAG-CGAUA ACAGGUCUGU GAUGCCCUUA GA-UGUCCGG
#Homo_sapiens
CCGA-GAUU- -GAG-CAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUCCGG
#Lanice
GCGA-GAUU- -GAG-CAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUUCGG
#Lepidodermella
GCGA-AAUU- -GAG-CAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUCCGG
#Limicolaria_kambeul ACGA-GAUU- -GAG-CAAUA
ACAGGUCUGU GAUGCCCUUA GA-UGUCCGG
#Mnemiopsis_leidyi UGGA-AGUUU
GAGG-CAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUUCUG
#Nematodirus_battus ACGA-GAUU-
-GAG-CGAUA ACAGGUCUGU GAUGCCCUUA GA-UGUCCGG
#Opisthorchis_viverrini ACGA-AAUU- -GAG-CAAUA ACAGGUCUGU
GAUGCCCUUA GA-UGUCCGG
#Pellioditis_typica ACGA-GAAG-
-GAG-CGAUA ACAGGUCUGU GAUGCCCUUA GA-UGUCCGG
#Placopecten
ACGA-GAUU- -GAG-CAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUUAGG
#Priapulus_caudatus ACGA-GAUU-
-GAG-CAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUCCGG
#Saccharomyces_cerevisiae UGGA-AGUUU -GAGGCAAUA ACAGGUCUGU GAUGCCCUUA
GAACGUUCUG
#Saccoglossus_kowalevskii -CGA-GAUU- -GAG-CAAUA ACAGGUCUGU GAUGCCCUUA
GA-UGUCCGG
#Scypha_ciliata
UGGA-AGUUU -GAGGCAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUUCUG
#S_purpuratus
GCGA-GAUU- -GAG-CAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUUCGG
#Tenebrio_molitor
ACGA-GAUU- -GAG-CAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUUCUG
#Xenopus_laevis
ACGA-GAUC- -GAG-CAAUA ACAGGUCUGU GAUGCCCUUA GA-UGUCCGG
#Brachionus
GGGCAUACGC GCGCUACACU GAAGGGAUAA GC-GUGU--- --UUUUCCUG
#Philodina
GGCUGCACGC GCGCUACACU GGAGAGUUCA GA-AUGUU-- --UCUUCCUA
#N_pseudemydis
GGCUGCACGC GCGCUACAAU GGGGGCUUCA AA--AAG--- --CGUUCCUG
#Centrorhynchus
GGCUGCACGC GCGCUACAAU GGCGGCCACA GA--GCG--- -CACAACGCU
#Moniliformis
GGCUGCACGC GCGCUACAAU GGAGGGCUCA GA-AAGC--- ---GUAACGA
#Acanthopleura
GGCCGCACGC GCGCUACACU GAAGGAAUCA GC-GUGU--- GUCGUUCCUG
#Anemonia
GGCCGCACGC GCGCUACACU GACGAUGUCA AC-GAGU--- --CUCUCCUU
#Anthopleura
G-CCGGACGC GCGCUACACU GACGAUGUCA AC-GAGU--- --CUCUCCUU
#Artemia
GGCCGCACGC GCGCUACACU GGAAGAAUCA GC-GCGU--- ---CCUCCCU
#C_elegans
GGCUGCACGC GUGCUACACU GGUGGAGUCA GC-GGGU--- --UUUUCCU-
#Eisenia_foetida
GGC-GCACGC GCGCUACACU GAAGGAGUCA AC-GUGU--- CUGCUUCCUG
#Eurypelma
GGCCGCACGC GCGCUACACU GAAGGAAUCA GC-GUGU--- -GCUUUCCCU
#Haemonchus_placei GGCUGCACGC
GCGCUACAAU GGAAGAAUCA GC-UGGC--- --CUAUCCAU
#Homo_sapiens
GGCUGCACGC GCGCUACACU GACUGGCUCA GC-GUGU--- GCCUACCCUA
#Lanice
GGCCGCACGC GCGCUACACU GAAGGAAUCA AC-GUGU--- GUCGCUCCUG
#Lepidodermella
GGCCGCACGC GCGCUACAAU GAGGUACGCA GU-GUGCC-C GCAAAGCCUG
#Limicolaria_kambeul GGCCGCACAC ACGCUACACU
GAAGGAAUCA GC-GUGG--A UGCCUCCCUG
#Mnemiopsis_leidyi GGCCACACGC
GCGUUACACU GAUGAAGCCA GC-GAGU--- AUAUCGCCUU
#Nematodirus_battus GGCUGCACGC
GCGCUACAAU GGAAGAAUCA GC-UGGC--- --CUAUCCAU
#Opisthorchis_viverrini GGCCGCACGU GCGCUACAAU GACGGUUUCA
AC-GAGU--U UGGGAUCCUA
#Pellioditis_typica GGCUGCACGC
GCGCCACACU GGGAGAAUCA UU-AGG---- ---UGUCCAU
#Placopecten
GGCCGCACGC GCGCUACACU GAAGGAAUCA AC-GUGC--- UCUUAUCCUU
#Priapulus_caudatus GGCUGCACGC
GCGCUACACU GAAGGAAUCA GC-GUGC--- AUUUUGCCUU
#Saccharomyces_cerevisiae GGCCGCACGC GCGCUACACU GACGGAGCCA GC-GAGU---
--CUAACCUU
#Saccoglossus_kowalevskii GGC--CACGC GCGCUACACU GAAGGGAUCA GC-GGGU--G
UCGCCUCCCU
#Scypha_ciliata
GGCCGCACGC GCGCUACACU GAUGAAGUCA GC-GAGU--- --UCUUCCUU
#S_purpuratus
GGCCGCACGC GCGCUACACU GAAGGAAUCA GC-GUGU--- GUCUUCCCUU
#Tenebrio_molitor
GGCCGCACGC GCGCUACACU GAAGGAAUCA GC-GUGU--- ---CCUCCCU
#Xenopus_laevis
GGCUGCACGC GCGCUACACU GAACGGAUCA GC-GUGU--- GUCUACCCUG
#Brachionus
-CUCCGA-AA -GGAGU--GG GUA-AUCCGC UGAAA--CCC UUCG-UGAUU
#Philodina
-CUUCGA-CA -GGAGU--GG GU--AACCAU -GAAAUUCUC UUCG-UGACU
#N_pseudemydis
-GUCCGA-AA -GGAUC-AGG G-A-AUCAUA ---AAUAGCC UUCA-CGAUU
#Centrorhynchus
-UCCUGU-AA CGGAU--GCG G-A-AACGUC ---AAUGGCU UUCG-UGACU
#Moniliformis
-UUUCGA-CA -GAAAU--CG G-C-AAUCAU --AAAUAGCC UUCU-UGAUU
#Acanthopleura
-GCCCGG-AA -GGGCU--GG GUA-ACCCGU -UGAACCUCC UUCG-UGCUA
#Anemonia
-GGCCGA-AA -GGUCU--GG GUA-AUCUUC -UCAAACAUC GUCG-UGCUG
#Anthopleura
-GGCCGA-AA -GGUCU--GG GUA-AUCUUA -UGAAACAUC GUCG-UGCUG
#Artemia
-GUCCGA-GA -GGACC--GG GUA-A-CCGC -UGAACCUCU UCCG-UGGUU
#C_elegans
AUGCCGA-AA -GGUAU--CG GUA-AACCGU -UGAAAUUCU UCCA-UGUCC
#Eisenia_foetida
-AUCCGA-AA -GGACC--GG GCA-ACCCGA -UGAACUUCC UUCG-UGCUA
#Eurypelma
-GUCCGG-UA -GGACU--GG GUA-ACCCGU -UCAACCUCC UUCG-UGAUA
#Haemonchus_placei -UGCCGA-AA
-GGCAU--UG GUA-AACCGU -UGAAACUCU UCCG-UGACC
#Homo_sapiens
-CGCCGG-CA -GGCGC--GG GUA-ACCCGU -UGAACCCCA UUCG-UGAUG
#Lanice
-ACCCGA-GA -GGGUC--GG GCA-ACCAG? -UGAACCUCC UUCG-UGCUA
#Lepidodermella
-AUCCGA-AA -GGAUU--GG GUA-AUCAUU -UAAAUUUAC CUCG-UAAUA
#Limicolaria_kambeul -GCCCGA-AA -GG-UU--GG
GAA-ACCCGU -UGAAUCUCC UUCG-UGCUA
#Mnemiopsis_leidyi -CACCGG-AA
-GGUGC--GG GUA-AUCUUG -UGAAACUUC AUCG-UGCUG
#Nematodirus_battus -UACCGA-AA
-GGUAU--UG GUA-AACCGU -UGAAACUCU UCCG-UGACC
#Opisthorchis_viverrini -GCCCGA-AA -GGUUU--GG GUA-AACUGA
-ACCAUAACC GUCG-UGACU
#Pellioditis_typica -GGCCGA-AA
-GGCUU--UG GUA-AUCCUU UUGAACCUCU CCCG-UGGCC
#Placopecten
-GCCCGG-AA -GGGUU--GG GUA-ACCCGU -UGAACCUCC UUCG-UGCUA
#Priapulus_caudatus -GUCUGG-AA
-GGACU--GG GUA-ACCCGA -UGAACCUCC UUCG-UGCUA
#Saccharomyces_cerevisiae -GGCCGA-GA -GGUCU--UG GUA-AUCUUG -UGAAACUCC
GUCG-UGCUG
#Saccoglossus_kowalevskii -GGCCGA-CA -GGACCC-AG GCA-AUCCGA -UGAGCCCCC
UUCG-UGCUA
#Scypha_ciliata
-CACCGA-UA -GGUGU--GG GUA-AUCUUG -UGAAACUUC AUCG-UGCUG
#S_purpuratus
-GGCCGG-AA -GGUCU--GG GAA-AUCCGU -UGAACCUCU UUCG-UGAUU
#Tenebrio_molitor
-GGCCGA-GC -GGCCC--GG GUA-ACCCGC -UGAACCUCC UUCG-UGCUA
#Xenopus_laevis
-CGCCGA-CA -GGUGC--GG GUA-ACCCGC -UGAACCCCG UUCG-UGAUA
#Brachionus
GGGAU-CGGG GCU------- ---UGAAAUU AU-UCUCC-G U-GAAC-GAG
#Philodina
GGGAU-CGGA GCU------- ---UGCAAUU AU-UCUCC-G U-CAAC-GAG
#N_pseudemydis
GGGAU-CGGA GAU------- ---UGUAAUU AU-UCUUC-G U-GAAA-GAG
#Centrorhynchus
GGGAU-CAGG GAC------- ---UGAAACU UU-UAUUU-G U-GAAC-GAG
#Moniliformis
GGGAU-CGGA GAU------- ---UGUAAUU AU-UCUUC-G U-CAAC-GAG
#Acanthopleura
GGGAU-UGGG GCU------- ---UGUAAUU CU-UCCCC-A U-GAAC-GAG
#Anemonia
GGGAU-AGAU CAU------- ---UGCAAUU UU-UGAUC-U U-GAAC-GAG
#Anthopleura
GGGAU-AGAU CAU------- ---UGCAAUU UU-UGAUC-U U-GAAC-GAG
#Artemia
GGGAU-UGGG GAC------- ---UGCAAGG A--UCCCC-A U-GAAC-CAG
#C_elegans
GGGAU-AGGG UAU------- ---UGUAAUU AU-UGCCC-U U-AAAC-GAG
#Eisenia_foetida
GGGAU-UGGG GCU------- ---UGUAAUU CU-UCCCC-A U-GAAC-GAG
#Eurypelma
GGGAU-AGGG GCU------- ---UGUAAUU GU-UCCCC-U U-GAAC-GAG
#Haemonchus_placei GGGAU-AGGG
AAU------- ---UGUAAUU AU-UUCCC-U U-GAAC-GAG
#Homo_sapiens
GGGAU-CGGG GAU------- ---UGCAAUU AU-UCCCC-A U-GAAC-GAG
#Lanice
GGGAU-UGGG GCU------- ---UGUAAUU CC-UCCCC-A U-GAAC-GAG
#Lepidodermella
GGGAU-UGAG CAU------- ---UGUAACU AU-UGCUC-A U-GAAC-GAG
#Limicolaria_kambeul GGGAU-UGGG GCU-------
---UGUAAUU CU-UCCCC-A U-GAAC-GAG
#Mnemiopsis_leidyi GGGAU-AGAC
CAU------- ---UGCAAUU AU-UGGUC-U U-GAAC-GAG
#Nematodirus_battus GGGAU-AGGG
AAU------- ---UGUAAUU AU-UUCCC-U U-GAAC-GAG
#Opisthorchis_viverrini GGGAU-CGGG GCU------- ---UGCAAUU
GU-UCCCC-G U-GAAC-GAG
#Pellioditis_typica GGGAU-AGGG
AUU------- ---UGUAAUU AU-UUCCC-U U-GAAC-GAG
#Placopecten
GGGAU-UGGG GCU------- ---UGUAAUU CU-UCCCC-A U-GAAC-GAG
#Priapulus_caudatus GGGAU-AGGG
AAU------- ---UGCAAUU AU-UUCCC-U U-GAAC-GAG
#Saccharomyces_cerevisiae GGGAU-AGAG CAU------- ---UGUAAUU AU-UGCUC-U
U-CAAC-GAG
#Saccoglossus_kowalevskii GGGAU-AGGG AAU------- ---UGUAAUU AU-UUCCC-U
U-GAAC-GAG
#Scypha_ciliata
GGGAU-AGAC CAU------- ---UGCAAUU AU-UGGUC-U U-CAAC-GAG
#S_purpuratus
GGGAU-AGGG AAU------- ---UGUAAUU AU-UUCCC-U U-GAAC-GAG
#Tenebrio_molitor
GGGAU-UGGG GCU------- ---UGCAAUU GU-UCCCC-A U-GAAC-GAG
#Xenopus_laevis
GGGAU-CGGG GAU------- ---UGCAAUU AU-UUCCC-A U-GAAC-GAG
#Brachionus
GAAUUCCCAG UAAG-CGCGA GUCAUAAGCU CGCGUUGAUU ACGUCCCUGC
#Philodina
GAAUUCCUAG UAAGCACUAU UUCAUCAGAA UGUGCUGAUU AUGUCCCUGU
#N_pseudemydis
GAAUUCCUAG UAAA-CGCGA AUCAUUAUUU CGCGUUGACU AAGUCCCUGC
#Centrorhynchus
GAAUUUCUAG UAAG-CGCGG GUCAUUACCC CGCACUGAUU AAGUCCCCGC
#Moniliformis
GAAUUCCUAG UAAA-CGCGA AUCGUUAUUU CGUGUUGAUU AAGUCCCUGC
#Acanthopleura
GAAUUCCCAG UAAG-CGCGA GUCAUAAGCU CG?GUUGAUU ACGUCCCUGC
#Anemonia
GAAUUCCUAG UAAG-CGCGA GUCAUCAGCU CGCGUUGAUU ACGUCCCUGC
#Anthopleura
GAAUUCCUAG UAAG-CGCGA GUCAUCAGCU CGCGUUGAUU ACGUCCCUGC
#Artemia
GAAUCCCUAG UAGG-CGCAA GUCAUUAGCU UGCGUCGAUU ACGUCCCUGC
#C_elegans
GAAUGCCUAG UAAG-UGUGA GUCAUCAGCU CACGUUGAUU ACGUCCCUGC
#Eisenia_foetida
GAAUUCCCAG UAAG-CGCGA GUCAUAAGCU CGCGUUGAUU ACGUCCCUGC
#Eurypelma
GAAUUCCCAG UAAG-CACGA GUCAUAAGCU CGUGUUGAUU ACGUCCCUGC
#Haemonchus_placei GAAUUCCUAG
UAAG-UGUGA GUCAUCAGCU CACGCUGAUU ACGUCCCUGC
#Homo_sapiens
GAAUUCCCAG UAAG-UGCGG GUCAUAAGCU UGCGUUGAUU AAGUCCCUGC
#Lanice
GAAUUCCCAG UAAG-CGCGA GUCAUAAGCU CGCGUUGAUU ACGUCCCUGC
#Lepidodermella
GAAUUCCUAG UAAG-CGCGA GUCAUAAGCU UGCGUUGACU ACGUCCCUGC
#Limicolaria_kambeul GAAUUCCCAG UAAG-CGAGA
GUCAUAAG?U CGCGUUGAUU ACGUCCCUGC
#Mnemiopsis_leidyi GAAUUCCUAG
UAAG-CACGA GUCAUCAACU CGUGCUGAUU ACGUCCCUGC
#Nematodirus_battus GAAUUCCUAG
UAAG-UGUGA GUCAUCAGCU CACGCUGAUU ACGUCCCUGC
#Opisthorchis_viverrini GAAUUCCUGG UAAG-UGCAA GUCAUAAGCU
UGCGCUGAUU ACGUCCCUGC
#Pellioditis_typica GAAUUCCUAG
UAAG-UGUGA GUCAUCAACU CACGUUGAUU GCGUCCCUGC
#Placopecten
GAAUUCCCAG UAAG-CGCGA GUCAUAAGCU CGCGUUGAUU ACGUCCCUGC
#Priapulus_caudatus GAAUUCCCAG
UAAG-CGCGA GUCAUAAGCU CGUGUUGAUC ACGUCCCUGC
#Saccharomyces_cerevisiae GAAUUCCUAG UAAG-CGCAA GUCAUCAGCU UGCGUUGAUU
ACGUCCCUGC
#Saccoglossus_kowalevskii GAAUUCCCAG UAGG-CGCGA GUCAUAAGCU CGUGUCGAUU
ACGUCCCUGC
#Scypha_ciliata
GAAUUCCUAG UAAG-CGCAA GUCAUCAGCU UGCGUUGAUU ACGUCCCUGC
#S_purpuratus
GAAUUCCCAG UAAG-CGCGA GUCAUCAGCU CGCGUUGAUU ACGUCCCUGC
#Tenebrio_molitor
GAAUUCCCAG UAAG-CGCGA GUCAUAAGCU CGCGUUGAUU ACGUCCCUGC
#Xenopus_laevis
GAAUUCCCAG UAAG-UGCGG GUCAUAAGCU CGCGUUGAUU AAGUCCCUGC
#Brachionus
CCUUUGUACA CACCG-CCCG UCGCUACUAC -CGAUU-GAA UGGUUUAGUG
#Philodina
CCUUUGUACA CA-CG-CCCG UCGCUACUAC -CGAUU-GAA UGUUUUAGUG
#N_pseudemydis
CCUUUGUACA CACCG-CCCG UCGCUACUAC -CGAUC-GAA UGGUUUAGUG
#Centrorhynchus
CCUUUGUACA CACCG-CCCG UCGCUACUAC -CGAU--GAA UGUUUUGGUG
#Moniliformis
CCUUUGUACA CACCG-CCCG UCGCUACUAC -CGAUU-GAA UGGCUUAGUG
#Acanthopleura
CCUUUGUACA CACCG-CCCG UCGCUACUAC -CGAUU-GAA UGGUUUAGUG
#Anemonia
CCUUUGUACA CACCG-CCCG UCGCUACUAC -CGAUU-GAA UGGUUUAGUG
#Anthopleura
CCUUUGUACA CACCG-CCCG UCGCUACUAC -CGAUU-GAA UGGUUUAGUG
#Artemia
CCUUUGUACA CACCG-CCCG UCGCUACUAC -CGAUU-GAA UGAUUUAGUG
#C_elegans
CCUUUGUACA CACCG-CCCG UCGCUAUCCG -GGACU-GAA CUGAUUCGAG
#Eisenia_foetida
CCUUUGUACA CACCG-CCCG UCGCUACUAC -CGAUU-GGA UGGUUUAGUG
#Eurypelma
CCUUUGUACA CACCG-CCCG UCGCUACUAC -CGAUU-GAA UGAUUUAGUG
#Haemonchus_placei CAUUUGUACA
CACCG-CCCG UCGCUGUCCG -GGACU-GAG CUGUCUCGAG
#Homo_sapiens
CCUUUGUACA CACCG-CCCG UCGCUACUAC -CGAUU-GGA UGGUUUAGUG
#Lanice
CCUUUGUACA CACCG-CCCG UCGCUACUAC -CGAUU-GGA UGGUUUAGUG
#Lepidodermella
CCUUUGUACA CACCGCACCG UCGCUACUAC -CGAUU-GAA UGGUUUAGCG
#Limicolaria_kambeul CCUUUGUACA CACCG-CCCG
UCGCUACUAU -CGAUU-GAG CGGUUCAGUG
#Mnemiopsis_leidyi CCUUUGUACA
CACCG-CCCG UCGCUACUAC -CGAUU-GAA UGGUUUAGUG
#Nematodirus_battus CAUUUGUACA
CACCG-CCCG UCGCUGUCCG -GGACU-GAG CUGUCUCGAG
#Opisthorchis_viverrini CCUUUGUACA CACCG-CCCG UCGCUACUAC
-CGAUU-GAA UGGUUUAGCA
#Pellioditis_typica CCUUUGUACA
CACCG-CCCG UCGCUGUCCG -GAACU-GAA CUGUUUCGAG
#Placopecten
CCUUUGUACA CACCG-CCCG UCGCUACCUA CCGAUU-GAU UGGUUUGGUG
#Priapulus_caudatus CCUUUGUACA
CACCG-CCCG UCGCUACUAC -CGAUU-GAA UGAUUUAGUG
#Saccharomyces_cerevisiae CCUUUGUACA CACCG-CCCG UCGCUAGUAC -CGAUU-GAA
UGGCUUAGUG
#Saccoglossus_kowalevskii CCUUUGUACA CACCG-CCCG UCGCUACUAC -CGAUU-GAA
CGGUUUAGUG
#Scypha_ciliata
CCUUUGUACA CACCG-CCCG UCGCUACUAC -CGAUU-GAA UGGUUUAGUG
#S_purpuratus
CCUUUGUACA CACCG-CCCG UCGCUACUAC -CGAUU-GAA UGGUUUAGUG
#Tenebrio_molitor
CCUUUGUACA CACCG-CCCG UCGCUACUAC -CGAUU-GAA UGAUUUAGUG
#Xenopus_laevis
CCUUUGUACA CACCG-CCCG UCGCUACUAC -CGAUU-GGA UGGUUUAGUG
#Brachionus
AGAUCUUCGG AUUGGUCCGG AGGUGUCC-- ---------- ----------
#Philodina
AGAUCUUCGG CUUGGUUUUC GAGCGGC--- ---------- ----------
#N_pseudemydis
AGGUCUUCGG AUAGGUUGCA UGGAGCC--- ---------- ----------
#Centrorhynchus
AGGUCUGCCG AGAGGUGUCA UUAAGGC--- ---------- ----------
#Moniliformis
AGGUCUACGG AUAGGCUACA AGGUAGC--- ---------- ----------
#Acanthopleura
AGAGCCCCGG AUUGGUC-CC GGCAUGGGG- ---------- ----------
#Anemonia
AGGACUCCUG AUUGGCGCCG CGCCCCG--- ---------- ----------
#Anthopleura
AGGACUCCUG AUUGGCGCCG CGCCCCG--- ---------- ----------
#Artemia
AGAACUUCGG ACGACUCGCC AGGGCAGCU- ---------- ----------
#C_elegans
AAGAGUGGGG ACUGUCGCUU CGAGGUU--- ---------- ----------
#Eisenia_foetida
AGAUCCUCGG AUUGGACCCG GCCCGGAGG- ---------- ----------
#Eurypelma
AGGUCUUCGG AUUGGCGCUC GGAGCGGCC- ---------- ----------
#Haemonchus_placei AGGACUGCGG
ACUGCUGUAU CGAGGCC--- ---------- ----------
#Homo_sapiens
AGGCCCUCGG AUCGGCCCCG CCGGGGUCG- ---------- ----------
#Lanice
AGAUCCUCGG AUUGGUCCUG GCGUGGCGG- ---------- ----------
#Lepidodermella
AGAUUCUCGG AUUGGGCCAU AUUCGCUC-- ---------- ----------
#Limicolaria_kambeul AGGGCCUCGG AUUGGUCUCG
GUCUGGUAC- ---------- ----------
#Mnemiopsis_leidyi AGAUCUCGGG
AUUGGCGACG CCAUGC?--- ---------- ----------
#Nematodirus_battus AGGACUGCGG
ACUGCUGUAU CGAGGCU--- ---------- ----------
#Opisthorchis_viverrini AGGUCCUCGG AUUGGUGCCA UUGUAGUUGC
---------- ----------
#Pellioditis_typica AAGGCUGAGG
ACUGACUUUG UUCACUUGU- ---------- ----------
#Placopecten
AGCUCCUCGG AUUGGUCCCG ACACGGGGG- ---------- ----------
#Priapulus_caudatus AGGUCUUCGG
ACCGGUCCCG GCGAGAGGG- ---------- ----------
#Saccharomyces_cerevisiae AGGCCUCAGG AUCUGCUU-A GAGAAGGGG- ----------
----------
#Saccoglossus_kowalevskii AGAUCUUCGG AUCGCACGCG CGGGGACUG- ----------
----------
#Scypha_ciliata
AGAUCUUCGG AUUGCUGGCC CGGCGGCC-- ---------- ----------
#S_purpuratus
AGAUCCUCGG AUUGGCCGGG UCGCGGUU-- ---------- ----------
#Tenebrio_molitor
AGGUCUUCGG ACCGGUACGC GGUGGCGU-- ---------- ----------
#Xenopus_laevis
AGGUCCUCGG AUCGGCCCCG CCGGGGUCG- ---------- ----------
#Brachionus
-----GCAA- ---------- ---------- -----GGUCG CCUCU---AG
#Philodina
-----UCUCG ---------- ---------- -----GGUCG UUCGGUC--U
#N_pseudemydis
-----ACAA- ---------- ---------- -----GCUCC ACUGC----G
#Centrorhynchus
-----UUCU- ---------- ---------- -----GCCUC AUUGU----A
#Moniliformis
-----CAUCA ---------- ---------- -----GCUCU GUUGU----A
#Acanthopleura
-----G?AA- ---------- ---------- -----CCUCC GCC-----GG
#Anemonia
------GCCA ---------- ---------- ----CGGAGC AGCG----GA
#Anthopleura
-----GCAA- ---------- ---------- ----CGGAGC AGCG----GA
#Artemia
------CCG- ---------- ---------- ---GGCCGCU CGUG---GUG
#C_elegans
-----UAAC- ---------- ---------- ------GACU UCGU-----U
#Eisenia_foetida
-----GCAA- ---------- ---------- -----CCUUC GGGUC--GGU
#Eurypelma
-----GCAA- ---------- ---------- ----GGUCGC GCCG----GC
#Haemonchus_placei -----UUCG-
---------- ---------- ------GGUC GCGG-----U
#Homo_sapiens
-----GCCCA ---------- ---------- ---CGGCCCU GGCG----GA
#Lanice
-----GCAA- ---------- ---------- ----CCGCCG UGCC---AGU
#Lepidodermella
-----GCAA- ---------- ---------- -----GGGUG AGCA-----U
#Limicolaria_kambeul -----GCAA- ----------
---------- ---GUGCUGG CACC----GC
#Mnemiopsis_leidyi -----GCGA-
---------- ---------- -------GGC ACGG----CG
#Nematodirus_battus -----UUCG-
---------- ---------- ------GGUC GCGG-----U
#Opisthorchis_viverrini -----UUCG- ---------- ----------
----GCAGCU CGAC----CG
#Pellioditis_typica -----GUU--
---------- ---------- ---------- ---------C
#Placopecten
-----GCAA- ---------- ---------- ----CCCUCG AGUC----GG
#Priapulus_caudatus -----GAAA-
---------- ---------- ----CCCUCG CAUC----GG
#Saccharomyces_cerevisiae -----GCAA- ---------- ---------- -----CUCCA
UCUC----A-
#Saccoglossus_kowalevskii -----GUUCU ---------- ---------- ---CGGCCCU
CGUG----U-
#Scypha_ciliata
-----UUGU- ---------- ---------- ------GUUG CCGG----AC
#S_purpuratus
-----CGCC- ---------- ---------- ----GGC-AC GAUC----CU
#Tenebrio_molitor
-----UUCG- ---------- ---------- ----GCGUCG CCGA----UG
#Xenopus_laevis
-----GCCA- ---------- ---------- ---CGGCCCU GGCG----GA
#Brachionus
GU-GCCGAGA AG---AUGAU CA-AACUUGA UCAUUUAGAG GAAGUAAAAG
#Philodina
UU-AUCGAAA AG---AUGCU CA-AACUGGA UCAUUUAGAG GAAGUAAAAG
#N_pseudemydis
AA-UUCUAGA AA---CUGAC CG-AACUUAA CCAUUUAGAG GAAGUAAAAG
#Centrorhynchus
UC-UUUAUCA AG---CCGGU CA-AAUUUAA GCGUUUGGAG GAAGUAAAAG
#Moniliformis
UU-ACCUAAA AG---UUGGC CG-AACUUUA CCAUUUAGAG GAAGUAAAAG
#Acanthopleura
UGCGCCGAGA AG---UUGUU CG-AACUUGA UCAUUUAGAG GAAGUAAAAG
#Anemonia
CU-GCCGAGA AG---UUGUU CA-AACUUGA UCAUUUAGAG GAAGUAAAAG
#Anthopleura
AU-GCCGAAA AG---UUGUU CA-AACUUGA UCAUUUAGAG GAAGUAAAAG
#Artemia
UG-GUUGAAA GG---UUGUU CA-AACUUGA UCCUUUAGAG GAAGUAAAAG
#C_elegans
GU-UGCGGAA AC---CAUUU UU-AUCGCAU UGGUUUGAAC CGGGUAAAAG
#Eisenia_foetida
GA-UCCGAAA AG---ACGAU CA-AACUUGA UCAUCUAGAG GAAGUAAAAG
#Eurypelma
GU-GCCGGAA AGCGAUUGAC CA-AACUUGA UCAUUUAGAG GAAGUAAAAG
#Haemonchus_placei AU-GGCGGGA
AA---CAGUU CA-AUCGCAA UGGCUUGAAC CGGGUAAAAG
#Homo_sapiens
GC-GCUGAGA AG---ACGGU CG-AACUUGA CUAUCUAGAG GAAGUAAAAG
#Lanice
GU-GCCGAGA AG---ACGAU CG-AACUUGA UCAUCUAGAG GAAGUAAAAG
#Lepidodermella
GG-UCUGAGA AG---AAACU CA-AGCUUGA UCAUUUAGAG GAAGUAAAAG
#Limicolaria_kambeul UG-GCCGAGA AG---AAGCU
CG-AACUCGA UCGCUUGGAG AAAGUAAAAG
#Mnemiopsis_leidyi CC-GCCGAGA
AC---UUGCU CA-AACUUGA UCAUUUAGAG GAAGUAAAAG
#Nematodirus_battus AU-GGCGGGA
AA---CAGUU CA-AUCGCAA UGGCUUGAAC CGGGUAAAAG
#Opisthorchis_viverrini GU-GCUGAAA AG---ACGAC CA-AACUUGA
UCAUUUAGAG GAAGUAAAAG
#Pellioditis_typica AU-UGUUGGG
AA--UCAGUU GG-AUCGAAU UGGUUUGAAC CGGGCACAAG
#Placopecten
UGCGCCGAGA AG---ACGAG CA-AACUUGA UUAUUUAGAG GAAGUAAAAG
#Priapulus_caudatus UGUGCUGGGA
AG---AUGAC CA-AACUUGA UCAUUUAGAG GAAGUAAAAG
#Saccharomyces_cerevisiae GA-GCGGAGA AU---UUGGA CA-AACUUGG UCAUUUAGAG
GAACUAAAAG
#Saccoglossus_kowalevskii G--UCCGAGA AG---ACGAU CG-AACUUGA UCGUUUAGAG
GAAGUAAAAG
#Scypha_ciliata
AC-AGCGAGA AG---UUGAU CA-AACUUGA UCAUUUAGAG GAAGUAAAAG
#S_purpuratus
GC-GCUGAAA AG---ACGAU CA-AACUUGA UCAUUUAGAG GAAGUAAAAG
#Tenebrio_molitor
UU-GCUGGGA AG---AUGAC CA-AACUUGA UCAUUUAGAG GAAGUAAAAG
#Xenopus_laevis
GC-GCCGAGA AG---ACGAU CA-AACUUGA CUAUCUAGAG GAAGUAAAAG
#Brachionus
-UCGUAACAA GGUUUCCGUA
#Philodina
-UCGUAACAA GGUAUUCGUA
#N_pseudemydis
-UCGUAACAA GGUUUCCGUA
#Centrorhynchus
-UCGUAACAA GGUUUCCGUA
#Moniliformis
-UCGUAACAA GGUUUCCGUA
#Acanthopleura
-UCGUAACAA GGUUUCCGUA
#Anemonia
-UCGUAACAA GGUUUCCGUA
#Anthopleura
-UCGUAACAA GGUUUCCGUA
#Artemia
-UCGUAACAA GGUUUCCGUA
#C_elegans
-UCGUAACAA GGUAGCUGUA
#Eisenia_foetida
-UCGUAACAA GGUUUCCGUA
#Eurypelma
-UCGUAACAA GGUUUCCGUA
#Haemonchus_placei -UCGUAACAA
GGUAUCUGUA
#Homo_sapiens
-UCGUAACAA GGUUUCCGUA
#Lanice
-UCGUAACAA GGUUUCCGUA
#Lepidodermella
-UCGUAACAA GGUUUUCGUA
#Limicolaria_kambeul -UCGUAACAA GGUUUCCGUA
#Mnemiopsis_leidyi -UCGUAACAA
GGUUUCCGUA
#Nematodirus_battus -UCGUAACAA
GGUAUCUGUA
#Opisthorchis_viverrini -UCGUAACAA GGUUUCCGUA
#Pellioditis_typica -UCGUAACAA
GGUAG?????
#Placopecten
-UCGUAACAA GGUUUCCGUA
#Priapulus_caudatus -UCGUAACAA
GGUUUCCGUA
#Saccharomyces_cerevisiae -UCGUAACAA GGUUUCCGUA
#Saccoglossus_kowalevskii -UCGUAACAA -GGUUUCGUA
#Scypha_ciliata
-UCGUAACAA GGUUUCCGUA
#S_purpuratus
-UCGUAACAA GGUUUCCGUA
#Tenebrio_molitor
-UCGUAACAA GGUUUCCGUA
#Xenopus_laevis
-UCGUAACAA GGUUUCCGUA